Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC24.45■■□□□ 1.5
KCNQ4P56696 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC24.45■■□□□ 1.5
KCNQ4P56696 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
KCNQ4P56696 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC24.45■■□□□ 1.5
KCNQ4P56696 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC24.45■■□□□ 1.5
KCNQ4P56696 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
KCNQ4P56696 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
KCNQ4P56696 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
KCNQ4P56696 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
KCNQ4P56696 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
KCNQ4P56696 KRT18P31-201ENST00000506277 1292 ntBASIC24.44■■□□□ 1.5
KCNQ4P56696 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
KCNQ4P56696 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC24.44■■□□□ 1.5
KCNQ4P56696 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
KCNQ4P56696 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
KCNQ4P56696 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
KCNQ4P56696 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
KCNQ4P56696 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
KCNQ4P56696 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
KCNQ4P56696 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC24.43■■□□□ 1.5
KCNQ4P56696 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC24.43■■□□□ 1.5
KCNQ4P56696 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
KCNQ4P56696 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
KCNQ4P56696 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
KCNQ4P56696 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
KCNQ4P56696 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
KCNQ4P56696 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
KCNQ4P56696 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
KCNQ4P56696 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
KCNQ4P56696 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
KCNQ4P56696 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.43■■□□□ 1.5
KCNQ4P56696 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
KCNQ4P56696 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
KCNQ4P56696 AC093525.10-201ENST00000625130 1569 ntBASIC24.42■■□□□ 1.5
KCNQ4P56696 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
KCNQ4P56696 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
KCNQ4P56696 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
KCNQ4P56696 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC24.42■■□□□ 1.5
KCNQ4P56696 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.42■■□□□ 1.5
KCNQ4P56696 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
KCNQ4P56696 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC24.42■■□□□ 1.5
KCNQ4P56696 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC24.42■■□□□ 1.5
KCNQ4P56696 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
KCNQ4P56696 TOB2P1-201ENST00000469761 992 ntBASIC24.42■■□□□ 1.5
KCNQ4P56696 SEC1P-202ENST00000473944 940 ntBASIC24.42■■□□□ 1.5
KCNQ4P56696 CIB2-208ENST00000560618 804 ntTSL 2 BASIC24.42■■□□□ 1.5
KCNQ4P56696 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC24.42■■□□□ 1.5
KCNQ4P56696 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
KCNQ4P56696 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
KCNQ4P56696 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
KCNQ4P56696 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
KCNQ4P56696 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
KCNQ4P56696 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
KCNQ4P56696 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC24.42■■□□□ 1.5
KCNQ4P56696 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
KCNQ4P56696 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
KCNQ4P56696 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC24.41■■□□□ 1.5
KCNQ4P56696 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
KCNQ4P56696 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC24.41■■□□□ 1.5
KCNQ4P56696 HLA-F-220ENST00000434407 884 ntBASIC24.41■■□□□ 1.5
KCNQ4P56696 SPEG-225ENST00000617028 815 ntTSL 5 BASIC24.41■■□□□ 1.5
KCNQ4P56696 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
KCNQ4P56696 AP005212.1-201ENST00000581547 1997 ntBASIC24.41■■□□□ 1.5
KCNQ4P56696 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
KCNQ4P56696 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
KCNQ4P56696 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
KCNQ4P56696 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
KCNQ4P56696 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
KCNQ4P56696 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
KCNQ4P56696 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC24.4■■□□□ 1.5
KCNQ4P56696 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
KCNQ4P56696 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
KCNQ4P56696 DRAXINP1-201ENST00000437611 948 ntBASIC24.4■■□□□ 1.5
KCNQ4P56696 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
KCNQ4P56696 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC24.4■■□□□ 1.5
KCNQ4P56696 KRT16P4-201ENST00000453883 522 ntBASIC24.4■■□□□ 1.5
KCNQ4P56696 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
KCNQ4P56696 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC24.4■■□□□ 1.5
KCNQ4P56696 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
KCNQ4P56696 NAA38-203ENST00000575071 553 ntTSL 2 BASIC24.4■■□□□ 1.5
KCNQ4P56696 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
KCNQ4P56696 AL121772.3-201ENST00000610840 674 ntBASIC24.4■■□□□ 1.5
KCNQ4P56696 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
KCNQ4P56696 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
KCNQ4P56696 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
KCNQ4P56696 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
KCNQ4P56696 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
KCNQ4P56696 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.4■■□□□ 1.5
KCNQ4P56696 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
KCNQ4P56696 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
KCNQ4P56696 AC079834.2-201ENST00000609776 1949 ntBASIC24.39■■□□□ 1.5
KCNQ4P56696 GOLGA2P11-201ENST00000562660 1621 ntBASIC24.39■■□□□ 1.5
KCNQ4P56696 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC24.39■■□□□ 1.5
KCNQ4P56696 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC24.39■■□□□ 1.5
KCNQ4P56696 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
KCNQ4P56696 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
KCNQ4P56696 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
KCNQ4P56696 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.39■■□□□ 1.5
KCNQ4P56696 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
KCNQ4P56696 AL023284.2-201ENST00000405850 579 ntBASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms