Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDX1P52945 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDX1P52945 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDX1P52945 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDX1P52945 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDX1P52945 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.59■□□□□ 0.57
PDX1P52945 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PDX1P52945 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDX1P52945 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDX1P52945 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.59■□□□□ 0.57
PDX1P52945 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDX1P52945 UPK3BP1-201ENST00000428678 509 ntBASIC18.59■□□□□ 0.57
PDX1P52945 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDX1P52945 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDX1P52945 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PDX1P52945 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.59■□□□□ 0.57
PDX1P52945 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDX1P52945 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDX1P52945 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDX1P52945 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDX1P52945 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDX1P52945 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDX1P52945 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PDX1P52945 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDX1P52945 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDX1P52945 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
PDX1P52945 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDX1P52945 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PDX1P52945 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDX1P52945 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PDX1P52945 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDX1P52945 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.58■□□□□ 0.57
PDX1P52945 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDX1P52945 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PDX1P52945 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDX1P52945 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDX1P52945 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.58■□□□□ 0.56
PDX1P52945 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.58■□□□□ 0.56
PDX1P52945 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.58■□□□□ 0.56
PDX1P52945 COX11P1-201ENST00000489116 835 ntBASIC18.58■□□□□ 0.56
PDX1P52945 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.58■□□□□ 0.56
PDX1P52945 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.58■□□□□ 0.56
PDX1P52945 AC091076.1-201ENST00000610741 619 ntBASIC18.58■□□□□ 0.56
PDX1P52945 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
PDX1P52945 AC141257.4-201ENST00000634557 245 ntBASIC18.58■□□□□ 0.56
PDX1P52945 AC136944.6-201ENST00000634818 245 ntBASIC18.58■□□□□ 0.56
PDX1P52945 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.58■□□□□ 0.56
PDX1P52945 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDX1P52945 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDX1P52945 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.58■□□□□ 0.56
PDX1P52945 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.58■□□□□ 0.56
PDX1P52945 AC138932.1-201ENST00000534164 6830 ntBASIC18.57■□□□□ 0.56
PDX1P52945 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDX1P52945 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDX1P52945 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.57■□□□□ 0.56
PDX1P52945 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDX1P52945 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDX1P52945 LINC01465-201ENST00000408887 1940 ntBASIC18.57■□□□□ 0.56
PDX1P52945 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDX1P52945 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.57■□□□□ 0.56
PDX1P52945 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.57■□□□□ 0.56
PDX1P52945 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.57■□□□□ 0.56
PDX1P52945 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDX1P52945 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.57■□□□□ 0.56
PDX1P52945 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.57■□□□□ 0.56
PDX1P52945 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.57■□□□□ 0.56
PDX1P52945 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.57■□□□□ 0.56
PDX1P52945 TSPY5P-201ENST00000426936 936 ntBASIC18.57■□□□□ 0.56
PDX1P52945 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PDX1P52945 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDX1P52945 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.57■□□□□ 0.56
PDX1P52945 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.57■□□□□ 0.56
PDX1P52945 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.57■□□□□ 0.56
PDX1P52945 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.57■□□□□ 0.56
PDX1P52945 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.57■□□□□ 0.56
PDX1P52945 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.57■□□□□ 0.56
PDX1P52945 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDX1P52945 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDX1P52945 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDX1P52945 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
PDX1P52945 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
PDX1P52945 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.57■□□□□ 0.56
PDX1P52945 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDX1P52945 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDX1P52945 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDX1P52945 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDX1P52945 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.56■□□□□ 0.56
PDX1P52945 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PDX1P52945 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDX1P52945 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDX1P52945 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDX1P52945 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PDX1P52945 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDX1P52945 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDX1P52945 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDX1P52945 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.56■□□□□ 0.56
PDX1P52945 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.56■□□□□ 0.56
PDX1P52945 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.56■□□□□ 0.56
PDX1P52945 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDX1P52945 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms