Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP11P51784 CA15P1-201ENST00000481698 905 ntBASIC21.67■■□□□ 1.06
USP11P51784 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
USP11P51784 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.67■■□□□ 1.06
USP11P51784 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.67■■□□□ 1.06
USP11P51784 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.67■■□□□ 1.06
USP11P51784 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP11P51784 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
USP11P51784 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP11P51784 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
USP11P51784 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.67■■□□□ 1.06
USP11P51784 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP11P51784 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
USP11P51784 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP11P51784 FEM1AP3-201ENST00000403722 1741 ntBASIC21.66■■□□□ 1.06
USP11P51784 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP11P51784 CYP2D8P-201ENST00000433633 1490 ntBASIC21.66■■□□□ 1.06
USP11P51784 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP11P51784 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.66■■□□□ 1.06
USP11P51784 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP11P51784 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP11P51784 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP11P51784 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.66■■□□□ 1.06
USP11P51784 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP11P51784 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.66■■□□□ 1.06
USP11P51784 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.66■■□□□ 1.06
USP11P51784 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.66■■□□□ 1.06
USP11P51784 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.66■■□□□ 1.06
USP11P51784 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.66■■□□□ 1.06
USP11P51784 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
USP11P51784 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.66■■□□□ 1.06
USP11P51784 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP11P51784 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
USP11P51784 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
USP11P51784 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.66■■□□□ 1.06
USP11P51784 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP11P51784 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP11P51784 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
USP11P51784 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
USP11P51784 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP11P51784 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP11P51784 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.65■■□□□ 1.06
USP11P51784 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.65■■□□□ 1.06
USP11P51784 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.65■■□□□ 1.06
USP11P51784 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
USP11P51784 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP11P51784 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP11P51784 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.65■■□□□ 1.06
USP11P51784 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.65■■□□□ 1.06
USP11P51784 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP11P51784 C2orf69P3-201ENST00000565542 1120 ntBASIC21.65■■□□□ 1.06
USP11P51784 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP11P51784 AC010947.1-201ENST00000623454 693 ntBASIC21.65■■□□□ 1.06
USP11P51784 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
USP11P51784 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP11P51784 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP11P51784 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
USP11P51784 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
USP11P51784 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP11P51784 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.65■■□□□ 1.06
USP11P51784 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP11P51784 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
USP11P51784 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
USP11P51784 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
USP11P51784 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
USP11P51784 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.64■■□□□ 1.05
USP11P51784 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
USP11P51784 TSPY14P-201ENST00000303979 915 ntBASIC21.64■■□□□ 1.05
USP11P51784 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.64■■□□□ 1.05
USP11P51784 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.64■■□□□ 1.05
USP11P51784 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
USP11P51784 NAPSB-206ENST00000562112 1266 ntBASIC21.64■■□□□ 1.05
USP11P51784 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.64■■□□□ 1.05
USP11P51784 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.64■■□□□ 1.05
USP11P51784 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP11P51784 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.64■■□□□ 1.05
USP11P51784 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.64■■□□□ 1.05
USP11P51784 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP11P51784 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP11P51784 FP475955.4-201ENST00000623131 1990 ntBASIC21.63■■□□□ 1.05
USP11P51784 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.63■■□□□ 1.05
USP11P51784 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP11P51784 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.63■■□□□ 1.05
USP11P51784 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
USP11P51784 SLC25A1P2-201ENST00000430693 912 ntBASIC21.63■■□□□ 1.05
USP11P51784 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.63■■□□□ 1.05
USP11P51784 EGLN1P1-201ENST00000531623 762 ntBASIC21.63■■□□□ 1.05
USP11P51784 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
USP11P51784 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.63■■□□□ 1.05
USP11P51784 IRX1P1-201ENST00000438849 1838 ntBASIC21.63■■□□□ 1.05
USP11P51784 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.63■■□□□ 1.05
USP11P51784 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP11P51784 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP11P51784 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP11P51784 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP11P51784 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USP11P51784 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP11P51784 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP11P51784 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.62■■□□□ 1.05
USP11P51784 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms