Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFSF9P41273 TSPY21P-201ENST00000433481 731 ntBASIC20.75■□□□□ 0.91
TNFSF9P41273 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.75■□□□□ 0.91
TNFSF9P41273 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF9P41273 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.75■□□□□ 0.91
TNFSF9P41273 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TNFSF9P41273 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.75■□□□□ 0.91
TNFSF9P41273 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TNFSF9P41273 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF9P41273 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TNFSF9P41273 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF9P41273 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TNFSF9P41273 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TNFSF9P41273 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.75■□□□□ 0.91
TNFSF9P41273 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF9P41273 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.75■□□□□ 0.91
TNFSF9P41273 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.75■□□□□ 0.91
TNFSF9P41273 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF9P41273 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.74■□□□□ 0.91
TNFSF9P41273 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF9P41273 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF9P41273 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF9P41273 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TNFSF9P41273 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.74■□□□□ 0.91
TNFSF9P41273 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
TNFSF9P41273 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.74■□□□□ 0.91
TNFSF9P41273 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.74■□□□□ 0.91
TNFSF9P41273 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.74■□□□□ 0.91
TNFSF9P41273 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.74■□□□□ 0.91
TNFSF9P41273 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF9P41273 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.74■□□□□ 0.91
TNFSF9P41273 C2orf69P3-201ENST00000565542 1120 ntBASIC20.74■□□□□ 0.91
TNFSF9P41273 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
TNFSF9P41273 AC145285.6-201ENST00000604632 637 ntBASIC20.74■□□□□ 0.91
TNFSF9P41273 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF9P41273 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TNFSF9P41273 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.74■□□□□ 0.91
TNFSF9P41273 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF9P41273 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF9P41273 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
TNFSF9P41273 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF9P41273 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF9P41273 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.74■□□□□ 0.91
TNFSF9P41273 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.74■□□□□ 0.91
TNFSF9P41273 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
TNFSF9P41273 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF9P41273 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TNFSF9P41273 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF9P41273 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.73■□□□□ 0.91
TNFSF9P41273 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF9P41273 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TNFSF9P41273 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.73■□□□□ 0.91
TNFSF9P41273 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF9P41273 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF9P41273 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.73■□□□□ 0.91
TNFSF9P41273 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.73■□□□□ 0.91
TNFSF9P41273 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF9P41273 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.73■□□□□ 0.91
TNFSF9P41273 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF9P41273 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF9P41273 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.73■□□□□ 0.91
TNFSF9P41273 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.73■□□□□ 0.91
TNFSF9P41273 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF9P41273 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.73■□□□□ 0.91
TNFSF9P41273 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF9P41273 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF9P41273 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.73■□□□□ 0.91
TNFSF9P41273 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TNFSF9P41273 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF9P41273 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TNFSF9P41273 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF9P41273 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.72■□□□□ 0.91
TNFSF9P41273 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.72■□□□□ 0.91
TNFSF9P41273 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.72■□□□□ 0.91
TNFSF9P41273 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF9P41273 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF9P41273 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF9P41273 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF9P41273 AC005332.7-201ENST00000614046 2005 ntBASIC20.72■□□□□ 0.91
TNFSF9P41273 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.72■□□□□ 0.91
TNFSF9P41273 TSPY14P-201ENST00000303979 915 ntBASIC20.72■□□□□ 0.91
TNFSF9P41273 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
TNFSF9P41273 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.72■□□□□ 0.91
TNFSF9P41273 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.72■□□□□ 0.91
TNFSF9P41273 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF9P41273 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF9P41273 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF9P41273 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF9P41273 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF9P41273 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
TNFSF9P41273 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF9P41273 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF9P41273 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
TNFSF9P41273 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.71■□□□□ 0.91
TNFSF9P41273 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF9P41273 ECEL1P2-202ENST00000465689 757 ntBASIC20.71■□□□□ 0.91
TNFSF9P41273 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF9P41273 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.71■□□□□ 0.91
TNFSF9P41273 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.71■□□□□ 0.91
TNFSF9P41273 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms