Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
MDH1P40925 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
MDH1P40925 GNAS-203ENST00000306120 1878 ntBASIC19.25■□□□□ 0.67
MDH1P40925 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MDH1P40925 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MDH1P40925 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MDH1P40925 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MDH1P40925 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
MDH1P40925 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.25■□□□□ 0.67
MDH1P40925 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.25■□□□□ 0.67
MDH1P40925 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MDH1P40925 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.25■□□□□ 0.67
MDH1P40925 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MDH1P40925 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MDH1P40925 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MDH1P40925 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MDH1P40925 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MDH1P40925 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MDH1P40925 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.25■□□□□ 0.67
MDH1P40925 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.25■□□□□ 0.67
MDH1P40925 PCDHA12-202ENST00000613593 2588 ntBASIC19.25■□□□□ 0.67
MDH1P40925 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.25■□□□□ 0.67
MDH1P40925 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MDH1P40925 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
MDH1P40925 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MDH1P40925 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MDH1P40925 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
MDH1P40925 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MDH1P40925 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MDH1P40925 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
MDH1P40925 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.24■□□□□ 0.67
MDH1P40925 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
MDH1P40925 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MDH1P40925 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MDH1P40925 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.24■□□□□ 0.67
MDH1P40925 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.24■□□□□ 0.67
MDH1P40925 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.24■□□□□ 0.67
MDH1P40925 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
MDH1P40925 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MDH1P40925 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.24■□□□□ 0.67
MDH1P40925 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.24■□□□□ 0.67
MDH1P40925 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.24■□□□□ 0.67
MDH1P40925 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.24■□□□□ 0.67
MDH1P40925 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
MDH1P40925 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MDH1P40925 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MDH1P40925 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MDH1P40925 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.24■□□□□ 0.67
MDH1P40925 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.24■□□□□ 0.67
MDH1P40925 AC019069.1-201ENST00000610008 1333 ntBASIC19.24■□□□□ 0.67
MDH1P40925 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.24■□□□□ 0.67
MDH1P40925 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
MDH1P40925 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MDH1P40925 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MDH1P40925 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MDH1P40925 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MDH1P40925 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MDH1P40925 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MDH1P40925 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MDH1P40925 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MDH1P40925 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.23■□□□□ 0.67
MDH1P40925 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MDH1P40925 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MDH1P40925 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.23■□□□□ 0.67
MDH1P40925 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.23■□□□□ 0.67
MDH1P40925 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MDH1P40925 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MDH1P40925 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.23■□□□□ 0.67
MDH1P40925 AC083906.6-201ENST00000641366 219 ntBASIC19.23■□□□□ 0.67
MDH1P40925 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MDH1P40925 SDHAP1-207ENST00000440850 2000 ntBASIC19.23■□□□□ 0.67
MDH1P40925 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MDH1P40925 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.23■□□□□ 0.67
MDH1P40925 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.23■□□□□ 0.67
MDH1P40925 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MDH1P40925 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MDH1P40925 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MDH1P40925 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.23■□□□□ 0.67
MDH1P40925 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MDH1P40925 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MDH1P40925 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MDH1P40925 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MDH1P40925 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MDH1P40925 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.23■□□□□ 0.67
MDH1P40925 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MDH1P40925 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
MDH1P40925 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MDH1P40925 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MDH1P40925 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MDH1P40925 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MDH1P40925 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
MDH1P40925 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MDH1P40925 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.22■□□□□ 0.67
MDH1P40925 YBX1P1-201ENST00000445822 960 ntBASIC19.22■□□□□ 0.67
MDH1P40925 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MDH1P40925 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.22■□□□□ 0.67
MDH1P40925 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
MDH1P40925 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MDH1P40925 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MDH1P40925 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms