Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.19■□□□□ 0.82
CHRNA3P32297 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHRNA3P32297 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CHRNA3P32297 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHRNA3P32297 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHRNA3P32297 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.19■□□□□ 0.82
CHRNA3P32297 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.19■□□□□ 0.82
CHRNA3P32297 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRNA3P32297 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRNA3P32297 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRNA3P32297 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CHRNA3P32297 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHRNA3P32297 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRNA3P32297 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
CHRNA3P32297 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.19■□□□□ 0.82
CHRNA3P32297 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CHRNA3P32297 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRNA3P32297 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRNA3P32297 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRNA3P32297 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRNA3P32297 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRNA3P32297 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.18■□□□□ 0.82
CHRNA3P32297 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.18■□□□□ 0.82
CHRNA3P32297 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.18■□□□□ 0.82
CHRNA3P32297 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.18■□□□□ 0.82
CHRNA3P32297 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.18■□□□□ 0.82
CHRNA3P32297 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.18■□□□□ 0.82
CHRNA3P32297 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CHRNA3P32297 PRKY-204ENST00000533551 1019 ntBASIC20.18■□□□□ 0.82
CHRNA3P32297 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CHRNA3P32297 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.18■□□□□ 0.82
CHRNA3P32297 AC124016.1-201ENST00000609552 612 ntBASIC20.18■□□□□ 0.82
CHRNA3P32297 AL121829.2-201ENST00000620908 328 ntBASIC20.18■□□□□ 0.82
CHRNA3P32297 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRNA3P32297 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRNA3P32297 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRNA3P32297 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRNA3P32297 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
CHRNA3P32297 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CHRNA3P32297 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CHRNA3P32297 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHRNA3P32297 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CHRNA3P32297 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.18■□□□□ 0.82
CHRNA3P32297 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRNA3P32297 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.18■□□□□ 0.82
CHRNA3P32297 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CHRNA3P32297 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.17■□□□□ 0.82
CHRNA3P32297 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CHRNA3P32297 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHRNA3P32297 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHRNA3P32297 TFP1-202ENST00000475455 1573 ntBASIC20.17■□□□□ 0.82
CHRNA3P32297 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.17■□□□□ 0.82
CHRNA3P32297 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHRNA3P32297 ZNF815P-204ENST00000434898 1737 ntBASIC20.17■□□□□ 0.82
CHRNA3P32297 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.17■□□□□ 0.82
CHRNA3P32297 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHRNA3P32297 AC133681.1-201ENST00000465482 601 ntBASIC20.17■□□□□ 0.82
CHRNA3P32297 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.17■□□□□ 0.82
CHRNA3P32297 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.17■□□□□ 0.82
CHRNA3P32297 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHRNA3P32297 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.17■□□□□ 0.82
CHRNA3P32297 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
CHRNA3P32297 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.17■□□□□ 0.82
CHRNA3P32297 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHRNA3P32297 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHRNA3P32297 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHRNA3P32297 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.17■□□□□ 0.82
CHRNA3P32297 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHRNA3P32297 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.17■□□□□ 0.82
CHRNA3P32297 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.17■□□□□ 0.82
CHRNA3P32297 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRNA3P32297 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRNA3P32297 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHRNA3P32297 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.16■□□□□ 0.82
CHRNA3P32297 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.16■□□□□ 0.82
CHRNA3P32297 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRNA3P32297 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRNA3P32297 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.16■□□□□ 0.82
CHRNA3P32297 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.16■□□□□ 0.82
CHRNA3P32297 KRASP1-201ENST00000407852 552 ntBASIC20.16■□□□□ 0.82
CHRNA3P32297 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.16■□□□□ 0.82
CHRNA3P32297 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.16■□□□□ 0.82
CHRNA3P32297 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.16■□□□□ 0.82
CHRNA3P32297 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.16■□□□□ 0.82
CHRNA3P32297 RPS2P4-201ENST00000476944 856 ntBASIC20.16■□□□□ 0.82
CHRNA3P32297 AC008550.1-201ENST00000511500 884 ntBASIC20.16■□□□□ 0.82
CHRNA3P32297 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHRNA3P32297 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.16■□□□□ 0.82
CHRNA3P32297 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.16■□□□□ 0.82
CHRNA3P32297 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.16■□□□□ 0.82
CHRNA3P32297 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CHRNA3P32297 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRNA3P32297 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRNA3P32297 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.16■□□□□ 0.82
CHRNA3P32297 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CHRNA3P32297 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRNA3P32297 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHRNA3P32297 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRNA3P32297 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHRNA3P32297 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms