Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC005521.1-201ENST00000393351 872 ntBASIC19.68■□□□□ 0.74
SLC6A4P31645 AC113347.1-201ENST00000413321 391 ntBASIC19.68■□□□□ 0.74
SLC6A4P31645 AC007663.1-201ENST00000438948 1240 ntBASIC19.68■□□□□ 0.74
SLC6A4P31645 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC6A4P31645 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
SLC6A4P31645 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
SLC6A4P31645 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SLC6A4P31645 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A4P31645 AC093484.2-201ENST00000580996 2166 ntBASIC19.68■□□□□ 0.74
SLC6A4P31645 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A4P31645 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC6A4P31645 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC6A4P31645 TEX21P-204ENST00000641479 1693 ntBASIC19.68■□□□□ 0.74
SLC6A4P31645 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A4P31645 AC092338.2-201ENST00000568827 1415 ntBASIC19.68■□□□□ 0.74
SLC6A4P31645 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
SLC6A4P31645 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A4P31645 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC6A4P31645 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A4P31645 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A4P31645 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.67■□□□□ 0.74
SLC6A4P31645 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A4P31645 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC6A4P31645 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A4P31645 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC6A4P31645 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A4P31645 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC6A4P31645 AC128688.1-201ENST00000487626 519 ntBASIC19.67■□□□□ 0.74
SLC6A4P31645 AC010203.1-204ENST00000548782 407 ntBASIC19.67■□□□□ 0.74
SLC6A4P31645 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SLC6A4P31645 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC6A4P31645 AC116562.4-202ENST00000641738 218 ntBASIC19.67■□□□□ 0.74
SLC6A4P31645 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC6A4P31645 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A4P31645 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A4P31645 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A4P31645 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A4P31645 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SLC6A4P31645 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A4P31645 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A4P31645 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A4P31645 TERF1P1-201ENST00000311003 1181 ntBASIC19.66■□□□□ 0.74
SLC6A4P31645 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A4P31645 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC6A4P31645 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A4P31645 CCR12P-201ENST00000446203 998 ntBASIC19.66■□□□□ 0.74
SLC6A4P31645 CA15P1-201ENST00000481698 905 ntBASIC19.66■□□□□ 0.74
SLC6A4P31645 RN7SL850P-201ENST00000579959 291 ntBASIC19.66■□□□□ 0.74
SLC6A4P31645 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A4P31645 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A4P31645 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A4P31645 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC6A4P31645 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A4P31645 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A4P31645 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC6A4P31645 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SLC6A4P31645 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A4P31645 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC6A4P31645 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A4P31645 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A4P31645 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC6A4P31645 KRT18P57-201ENST00000443599 1254 ntBASIC19.65■□□□□ 0.74
SLC6A4P31645 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A4P31645 AL353719.1-201ENST00000566847 864 ntBASIC19.65■□□□□ 0.74
SLC6A4P31645 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC6A4P31645 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SLC6A4P31645 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC6A4P31645 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SLC6A4P31645 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC6A4P31645 AC073508.3-201ENST00000619697 1419 ntBASIC19.65■□□□□ 0.74
SLC6A4P31645 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A4P31645 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC6A4P31645 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A4P31645 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC6A4P31645 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A4P31645 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A4P31645 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC6A4P31645 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC6A4P31645 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC6A4P31645 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SLC6A4P31645 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A4P31645 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC6A4P31645 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.64■□□□□ 0.73
SLC6A4P31645 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
SLC6A4P31645 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SLC6A4P31645 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A4P31645 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
SLC6A4P31645 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A4P31645 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A4P31645 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
SLC6A4P31645 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC6A4P31645 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SLC6A4P31645 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
SLC6A4P31645 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A4P31645 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A4P31645 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A4P31645 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A4P31645 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC6A4P31645 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
SLC6A4P31645 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms