Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN3P20807 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN3P20807 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN3P20807 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN3P20807 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
CAPN3P20807 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN3P20807 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CAPN3P20807 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN3P20807 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.42■□□□□ 0.54
CAPN3P20807 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN3P20807 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.42■□□□□ 0.54
CAPN3P20807 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.42■□□□□ 0.54
CAPN3P20807 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.42■□□□□ 0.54
CAPN3P20807 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.42■□□□□ 0.54
CAPN3P20807 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.42■□□□□ 0.54
CAPN3P20807 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.42■□□□□ 0.54
CAPN3P20807 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.42■□□□□ 0.54
CAPN3P20807 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.42■□□□□ 0.54
CAPN3P20807 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN3P20807 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN3P20807 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN3P20807 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.42■□□□□ 0.54
CAPN3P20807 IRX1P1-201ENST00000438849 1838 ntBASIC18.42■□□□□ 0.54
CAPN3P20807 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN3P20807 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CAPN3P20807 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.41■□□□□ 0.54
CAPN3P20807 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN3P20807 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.41■□□□□ 0.54
CAPN3P20807 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN3P20807 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN3P20807 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN3P20807 AC005332.8-201ENST00000622750 2735 ntBASIC18.41■□□□□ 0.54
CAPN3P20807 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN3P20807 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CAPN3P20807 UBE2SP1-201ENST00000450587 669 ntBASIC18.41■□□□□ 0.54
CAPN3P20807 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
CAPN3P20807 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.41■□□□□ 0.54
CAPN3P20807 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.41■□□□□ 0.54
CAPN3P20807 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.41■□□□□ 0.54
CAPN3P20807 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN3P20807 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN3P20807 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN3P20807 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN3P20807 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN3P20807 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN3P20807 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.41■□□□□ 0.54
CAPN3P20807 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.41■□□□□ 0.54
CAPN3P20807 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN3P20807 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN3P20807 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.4■□□□□ 0.54
CAPN3P20807 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN3P20807 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.4■□□□□ 0.54
CAPN3P20807 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN3P20807 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN3P20807 AC124283.5-201ENST00000624661 1809 ntBASIC18.4■□□□□ 0.54
CAPN3P20807 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CAPN3P20807 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN3P20807 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CAPN3P20807 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN3P20807 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN3P20807 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN3P20807 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN3P20807 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.4■□□□□ 0.54
CAPN3P20807 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.4■□□□□ 0.54
CAPN3P20807 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.4■□□□□ 0.54
CAPN3P20807 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN3P20807 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CAPN3P20807 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN3P20807 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.4■□□□□ 0.54
CAPN3P20807 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CAPN3P20807 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
CAPN3P20807 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.39■□□□□ 0.54
CAPN3P20807 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CAPN3P20807 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CAPN3P20807 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN3P20807 AC018470.1-201ENST00000624790 3129 ntBASIC18.39■□□□□ 0.53
CAPN3P20807 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN3P20807 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN3P20807 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN3P20807 MIR718-201ENST00000390190 70 ntBASIC18.39■□□□□ 0.53
CAPN3P20807 AC008550.1-201ENST00000511500 884 ntBASIC18.39■□□□□ 0.53
CAPN3P20807 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN3P20807 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.39■□□□□ 0.53
CAPN3P20807 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.39■□□□□ 0.53
CAPN3P20807 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CAPN3P20807 MYC-209ENST00000641252 345 ntBASIC18.39■□□□□ 0.53
CAPN3P20807 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CAPN3P20807 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN3P20807 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN3P20807 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN3P20807 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN3P20807 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN3P20807 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CAPN3P20807 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CAPN3P20807 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN3P20807 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN3P20807 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN3P20807 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN3P20807 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.38■□□□□ 0.53
CAPN3P20807 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms