Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.79■□□□□ 0.44
TNFRSF1BP20333 AC098934.4-201ENST00000564127 592 ntBASIC17.79■□□□□ 0.44
TNFRSF1BP20333 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 AL121906.2-201ENST00000621597 723 ntBASIC17.78■□□□□ 0.44
TNFRSF1BP20333 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
TNFRSF1BP20333 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.77■□□□□ 0.44
TNFRSF1BP20333 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TNFRSF1BP20333 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TNFRSF1BP20333 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.77■□□□□ 0.43
TNFRSF1BP20333 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TNFRSF1BP20333 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TNFRSF1BP20333 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.77■□□□□ 0.43
TNFRSF1BP20333 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TNFRSF1BP20333 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TNFRSF1BP20333 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TNFRSF1BP20333 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.77■□□□□ 0.43
TNFRSF1BP20333 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms