Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PPP3CBP16298 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PPP3CBP16298 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PPP3CBP16298 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PPP3CBP16298 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PPP3CBP16298 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PPP3CBP16298 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PPP3CBP16298 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
PPP3CBP16298 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
PPP3CBP16298 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.16■□□□□ 0.34
PPP3CBP16298 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PPP3CBP16298 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.16■□□□□ 0.34
PPP3CBP16298 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.16■□□□□ 0.34
PPP3CBP16298 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.16■□□□□ 0.34
PPP3CBP16298 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.16■□□□□ 0.34
PPP3CBP16298 AC097493.4-201ENST00000641197 219 ntBASIC17.16■□□□□ 0.34
PPP3CBP16298 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PPP3CBP16298 AL031985.4-201ENST00000642138 673 ntBASIC17.16■□□□□ 0.34
PPP3CBP16298 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
PPP3CBP16298 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.16■□□□□ 0.34
PPP3CBP16298 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPP3CBP16298 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PPP3CBP16298 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPP3CBP16298 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPP3CBP16298 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPP3CBP16298 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPP3CBP16298 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPP3CBP16298 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PPP3CBP16298 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPP3CBP16298 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PPP3CBP16298 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PPP3CBP16298 FAM210CP-201ENST00000445714 574 ntBASIC17.15■□□□□ 0.34
PPP3CBP16298 AC116562.2-201ENST00000507042 360 ntBASIC17.15■□□□□ 0.34
PPP3CBP16298 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PPP3CBP16298 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.15■□□□□ 0.34
PPP3CBP16298 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.15■□□□□ 0.34
PPP3CBP16298 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PPP3CBP16298 AL445675.2-201ENST00000620291 557 ntBASIC17.15■□□□□ 0.34
PPP3CBP16298 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.15■□□□□ 0.34
PPP3CBP16298 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPP3CBP16298 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PPP3CBP16298 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPP3CBP16298 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPP3CBP16298 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PPP3CBP16298 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPP3CBP16298 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PPP3CBP16298 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.15■□□□□ 0.34
PPP3CBP16298 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PPP3CBP16298 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPP3CBP16298 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPP3CBP16298 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.14■□□□□ 0.33
PPP3CBP16298 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPP3CBP16298 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PPP3CBP16298 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.14■□□□□ 0.33
PPP3CBP16298 RBM17P1-201ENST00000453646 1190 ntBASIC17.14■□□□□ 0.33
PPP3CBP16298 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPP3CBP16298 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.14■□□□□ 0.33
PPP3CBP16298 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.14■□□□□ 0.33
PPP3CBP16298 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.14■□□□□ 0.33
PPP3CBP16298 REXO1L10P-201ENST00000615707 1290 ntBASIC17.14■□□□□ 0.33
PPP3CBP16298 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.14■□□□□ 0.33
PPP3CBP16298 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.14■□□□□ 0.33
PPP3CBP16298 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.14■□□□□ 0.33
PPP3CBP16298 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.14■□□□□ 0.33
PPP3CBP16298 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPP3CBP16298 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PPP3CBP16298 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPP3CBP16298 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPP3CBP16298 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPP3CBP16298 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPP3CBP16298 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PPP3CBP16298 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PPP3CBP16298 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.13■□□□□ 0.33
PPP3CBP16298 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPP3CBP16298 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPP3CBP16298 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPP3CBP16298 AL158211.5-201ENST00000623583 2518 ntBASIC17.13■□□□□ 0.33
PPP3CBP16298 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPP3CBP16298 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPP3CBP16298 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PPP3CBP16298 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms