Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
CFTRP13569 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
CFTRP13569 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CFTRP13569 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC32.89■■■□□ 2.86
CFTRP13569 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC32.89■■■□□ 2.86
CFTRP13569 AC139530.3-201ENST00000620344 690 ntBASIC32.89■■■□□ 2.86
CFTRP13569 LITAF-220ENST00000620789 692 ntTSL 5 BASIC32.89■■■□□ 2.86
CFTRP13569 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC32.89■■■□□ 2.86
CFTRP13569 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CFTRP13569 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC32.89■■■□□ 2.86
CFTRP13569 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
CFTRP13569 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
CFTRP13569 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC32.88■■■□□ 2.85
CFTRP13569 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
CFTRP13569 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
CFTRP13569 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC32.88■■■□□ 2.85
CFTRP13569 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
CFTRP13569 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC32.88■■■□□ 2.85
CFTRP13569 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC32.88■■■□□ 2.85
CFTRP13569 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
CFTRP13569 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
CFTRP13569 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
CFTRP13569 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC32.87■■■□□ 2.85
CFTRP13569 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC32.87■■■□□ 2.85
CFTRP13569 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC32.87■■■□□ 2.85
CFTRP13569 ABR-204ENST00000543210 1049 ntTSL 2 BASIC32.87■■■□□ 2.85
CFTRP13569 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC32.87■■■□□ 2.85
CFTRP13569 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC32.87■■■□□ 2.85
CFTRP13569 AL353801.3-201ENST00000609898 542 ntBASIC32.87■■■□□ 2.85
CFTRP13569 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CFTRP13569 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CFTRP13569 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CFTRP13569 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CFTRP13569 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC32.87■■■□□ 2.85
CFTRP13569 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CFTRP13569 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CFTRP13569 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CFTRP13569 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC32.86■■■□□ 2.85
CFTRP13569 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
CFTRP13569 PPIE-208ENST00000470213 927 ntTSL 3 BASIC32.86■■■□□ 2.85
CFTRP13569 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
CFTRP13569 AL390719.2-201ENST00000606993 987 ntBASIC32.86■■■□□ 2.85
CFTRP13569 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC32.86■■■□□ 2.85
CFTRP13569 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC32.86■■■□□ 2.85
CFTRP13569 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC32.86■■■□□ 2.85
CFTRP13569 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CFTRP13569 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC32.86■■■□□ 2.85
CFTRP13569 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC32.86■■■□□ 2.85
CFTRP13569 UBC-206ENST00000538617 1303 ntTSL 5 BASIC32.86■■■□□ 2.85
CFTRP13569 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC32.85■■■□□ 2.85
CFTRP13569 AL691432.2-201ENST00000607222 2038 ntBASIC32.85■■■□□ 2.85
CFTRP13569 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CFTRP13569 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CFTRP13569 MCCD1P1-208ENST00000445732 328 ntBASIC32.85■■■□□ 2.85
CFTRP13569 PENK-208ENST00000523051 772 ntTSL 5 BASIC32.85■■■□□ 2.85
CFTRP13569 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC32.85■■■□□ 2.85
CFTRP13569 TK1-205ENST00000590862 642 ntTSL 3 BASIC32.85■■■□□ 2.85
CFTRP13569 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC32.85■■■□□ 2.85
CFTRP13569 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC32.85■■■□□ 2.85
CFTRP13569 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CFTRP13569 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC32.84■■■□□ 2.85
CFTRP13569 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CFTRP13569 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CFTRP13569 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CFTRP13569 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CFTRP13569 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC32.84■■■□□ 2.85
CFTRP13569 TP73-AS1-207ENST00000624167 988 ntBASIC32.84■■■□□ 2.85
CFTRP13569 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CFTRP13569 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CFTRP13569 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC32.83■■■□□ 2.85
CFTRP13569 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
CFTRP13569 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
CFTRP13569 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CFTRP13569 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
CFTRP13569 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC32.83■■■□□ 2.85
CFTRP13569 PMS2P1-201ENST00000431037 1228 ntBASIC32.83■■■□□ 2.85
CFTRP13569 GRAMD4P1-201ENST00000435181 1110 ntBASIC32.83■■■□□ 2.85
CFTRP13569 AC138894.3-201ENST00000603787 634 ntBASIC32.83■■■□□ 2.85
CFTRP13569 NME4-212ENST00000621774 904 ntTSL 3 BASIC32.83■■■□□ 2.85
CFTRP13569 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC32.83■■■□□ 2.85
CFTRP13569 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC32.83■■■□□ 2.85
CFTRP13569 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CFTRP13569 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC32.83■■■□□ 2.85
CFTRP13569 AC026310.3-201ENST00000625186 2373 ntBASIC32.83■■■□□ 2.85
CFTRP13569 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.85
CFTRP13569 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.85
CFTRP13569 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC32.82■■■□□ 2.84
CFTRP13569 AC233702.3-201ENST00000578656 1387 ntBASIC32.82■■■□□ 2.84
CFTRP13569 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
CFTRP13569 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC32.82■■■□□ 2.84
CFTRP13569 AC104819.1-201ENST00000504587 486 ntBASIC32.82■■■□□ 2.84
CFTRP13569 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC32.82■■■□□ 2.84
CFTRP13569 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC32.82■■■□□ 2.84
CFTRP13569 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC32.82■■■□□ 2.84
CFTRP13569 AC112497.1-201ENST00000624824 639 ntBASIC32.82■■■□□ 2.84
CFTRP13569 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CFTRP13569 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC32.82■■■□□ 2.84
CFTRP13569 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CFTRP13569 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CFTRP13569 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC32.82■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms