Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BCKDHAP12694 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHAP12694 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
BCKDHAP12694 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.3■□□□□ 0.52
BCKDHAP12694 AC093525.10-201ENST00000625130 1569 ntBASIC18.3■□□□□ 0.52
BCKDHAP12694 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.3■□□□□ 0.52
BCKDHAP12694 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHAP12694 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.3■□□□□ 0.52
BCKDHAP12694 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHAP12694 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHAP12694 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.3■□□□□ 0.52
BCKDHAP12694 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.3■□□□□ 0.52
BCKDHAP12694 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.3■□□□□ 0.52
BCKDHAP12694 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHAP12694 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.3■□□□□ 0.52
BCKDHAP12694 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.3■□□□□ 0.52
BCKDHAP12694 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.3■□□□□ 0.52
BCKDHAP12694 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHAP12694 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHAP12694 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHAP12694 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHAP12694 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BCKDHAP12694 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHAP12694 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHAP12694 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHAP12694 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHAP12694 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHAP12694 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
BCKDHAP12694 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHAP12694 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHAP12694 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
BCKDHAP12694 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHAP12694 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHAP12694 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
BCKDHAP12694 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.29■□□□□ 0.52
BCKDHAP12694 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.29■□□□□ 0.52
BCKDHAP12694 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.29■□□□□ 0.52
BCKDHAP12694 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHAP12694 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHAP12694 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHAP12694 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHAP12694 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHAP12694 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.29■□□□□ 0.52
BCKDHAP12694 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.29■□□□□ 0.52
BCKDHAP12694 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.29■□□□□ 0.52
BCKDHAP12694 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
BCKDHAP12694 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.29■□□□□ 0.52
BCKDHAP12694 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.29■□□□□ 0.52
BCKDHAP12694 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
BCKDHAP12694 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHAP12694 AC008403.3-201ENST00000598924 454 ntBASIC18.29■□□□□ 0.52
BCKDHAP12694 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHAP12694 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.29■□□□□ 0.52
BCKDHAP12694 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHAP12694 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHAP12694 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHAP12694 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
BCKDHAP12694 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.28■□□□□ 0.52
BCKDHAP12694 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHAP12694 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.28■□□□□ 0.52
BCKDHAP12694 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHAP12694 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHAP12694 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHAP12694 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
BCKDHAP12694 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHAP12694 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHAP12694 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHAP12694 Z98044.1-201ENST00000632503 1764 ntBASIC18.28■□□□□ 0.52
BCKDHAP12694 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
BCKDHAP12694 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
BCKDHAP12694 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHAP12694 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
BCKDHAP12694 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHAP12694 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
BCKDHAP12694 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHAP12694 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHAP12694 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHAP12694 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.28■□□□□ 0.52
BCKDHAP12694 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.28■□□□□ 0.52
BCKDHAP12694 PRKY-204ENST00000533551 1019 ntBASIC18.28■□□□□ 0.52
BCKDHAP12694 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.28■□□□□ 0.52
BCKDHAP12694 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.28■□□□□ 0.52
BCKDHAP12694 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHAP12694 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
BCKDHAP12694 AC104581.1-202ENST00000635932 2618 ntBASIC18.28■□□□□ 0.52
BCKDHAP12694 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHAP12694 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHAP12694 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
BCKDHAP12694 AL512353.2-201ENST00000448759 1962 ntBASIC18.28■□□□□ 0.52
BCKDHAP12694 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
BCKDHAP12694 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.28■□□□□ 0.52
BCKDHAP12694 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BCKDHAP12694 NBPF21P-201ENST00000425093 1451 ntBASIC18.27■□□□□ 0.52
BCKDHAP12694 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCKDHAP12694 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCKDHAP12694 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCKDHAP12694 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.27■□□□□ 0.52
BCKDHAP12694 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
BCKDHAP12694 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCKDHAP12694 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms