Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A1P12107 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.8■■□□□ 1.08
COL11A1P12107 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A1P12107 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.8■■□□□ 1.08
COL11A1P12107 AL121894.2-201ENST00000602977 491 ntBASIC21.8■■□□□ 1.08
COL11A1P12107 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.8■■□□□ 1.08
COL11A1P12107 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A1P12107 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A1P12107 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A1P12107 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
COL11A1P12107 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.8■■□□□ 1.08
COL11A1P12107 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.8■■□□□ 1.08
COL11A1P12107 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A1P12107 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.8■■□□□ 1.08
COL11A1P12107 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A1P12107 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A1P12107 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A1P12107 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A1P12107 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A1P12107 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.8■■□□□ 1.08
COL11A1P12107 AL645929.1-201ENST00000420084 975 ntBASIC21.8■■□□□ 1.08
COL11A1P12107 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.8■■□□□ 1.08
COL11A1P12107 LINC01311-201ENST00000565162 1445 ntBASIC21.8■■□□□ 1.08
COL11A1P12107 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.79■■□□□ 1.08
COL11A1P12107 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.79■■□□□ 1.08
COL11A1P12107 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.79■■□□□ 1.08
COL11A1P12107 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
COL11A1P12107 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL11A1P12107 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
COL11A1P12107 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.79■■□□□ 1.08
COL11A1P12107 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.79■■□□□ 1.08
COL11A1P12107 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.79■■□□□ 1.08
COL11A1P12107 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.79■■□□□ 1.08
COL11A1P12107 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
COL11A1P12107 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
COL11A1P12107 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.79■■□□□ 1.08
COL11A1P12107 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.79■■□□□ 1.08
COL11A1P12107 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL11A1P12107 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL11A1P12107 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.79■■□□□ 1.08
COL11A1P12107 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL11A1P12107 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL11A1P12107 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL11A1P12107 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
COL11A1P12107 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL11A1P12107 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL11A1P12107 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.78■■□□□ 1.08
COL11A1P12107 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A1P12107 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A1P12107 AL031432.5-201ENST00000641059 760 ntBASIC21.78■■□□□ 1.08
COL11A1P12107 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A1P12107 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A1P12107 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A1P12107 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
COL11A1P12107 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A1P12107 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A1P12107 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A1P12107 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A1P12107 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A1P12107 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A1P12107 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A1P12107 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.78■■□□□ 1.08
COL11A1P12107 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
COL11A1P12107 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A1P12107 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.78■■□□□ 1.08
COL11A1P12107 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.78■■□□□ 1.08
COL11A1P12107 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.78■■□□□ 1.08
COL11A1P12107 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.78■■□□□ 1.08
COL11A1P12107 LINC01521-201ENST00000504184 1943 ntBASIC21.78■■□□□ 1.08
COL11A1P12107 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL11A1P12107 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.77■■□□□ 1.08
COL11A1P12107 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL11A1P12107 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL11A1P12107 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.77■■□□□ 1.08
COL11A1P12107 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.77■■□□□ 1.08
COL11A1P12107 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.77■■□□□ 1.08
COL11A1P12107 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.77■■□□□ 1.08
COL11A1P12107 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL11A1P12107 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.77■■□□□ 1.08
COL11A1P12107 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.77■■□□□ 1.08
COL11A1P12107 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.77■■□□□ 1.08
COL11A1P12107 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL11A1P12107 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
COL11A1P12107 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL11A1P12107 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL11A1P12107 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL11A1P12107 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL11A1P12107 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.07
COL11A1P12107 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
COL11A1P12107 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.77■■□□□ 1.07
COL11A1P12107 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.07
COL11A1P12107 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.77■■□□□ 1.07
COL11A1P12107 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.76■■□□□ 1.07
COL11A1P12107 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL11A1P12107 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.76■■□□□ 1.07
COL11A1P12107 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL11A1P12107 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
COL11A1P12107 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL11A1P12107 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL11A1P12107 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms