Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
THBS1P07996 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.63■□□□□ 0.41
THBS1P07996 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
THBS1P07996 KRASP1-201ENST00000407852 552 ntBASIC17.63■□□□□ 0.41
THBS1P07996 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
THBS1P07996 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
THBS1P07996 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
THBS1P07996 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
THBS1P07996 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.63■□□□□ 0.41
THBS1P07996 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
THBS1P07996 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.63■□□□□ 0.41
THBS1P07996 AL023875.1-201ENST00000640777 796 ntBASIC17.63■□□□□ 0.41
THBS1P07996 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
THBS1P07996 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.63■□□□□ 0.41
THBS1P07996 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.63■□□□□ 0.41
THBS1P07996 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
THBS1P07996 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
THBS1P07996 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
THBS1P07996 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
THBS1P07996 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
THBS1P07996 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
THBS1P07996 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
THBS1P07996 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
THBS1P07996 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
THBS1P07996 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
THBS1P07996 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
THBS1P07996 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
THBS1P07996 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
THBS1P07996 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
THBS1P07996 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
THBS1P07996 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
THBS1P07996 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
THBS1P07996 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
THBS1P07996 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
THBS1P07996 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.62■□□□□ 0.41
THBS1P07996 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
THBS1P07996 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
THBS1P07996 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
THBS1P07996 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
THBS1P07996 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
THBS1P07996 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.62■□□□□ 0.41
THBS1P07996 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.62■□□□□ 0.41
THBS1P07996 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
THBS1P07996 AC128676.1-201ENST00000454392 318 ntBASIC17.62■□□□□ 0.41
THBS1P07996 AC133681.1-201ENST00000465482 601 ntBASIC17.62■□□□□ 0.41
THBS1P07996 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.62■□□□□ 0.41
THBS1P07996 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
THBS1P07996 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.62■□□□□ 0.41
THBS1P07996 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.62■□□□□ 0.41
THBS1P07996 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.62■□□□□ 0.41
THBS1P07996 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.62■□□□□ 0.41
THBS1P07996 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
THBS1P07996 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.62■□□□□ 0.41
THBS1P07996 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
THBS1P07996 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
THBS1P07996 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
THBS1P07996 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
THBS1P07996 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
THBS1P07996 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.62■□□□□ 0.41
THBS1P07996 AC120498.9-201ENST00000339021 3867 ntBASIC17.62■□□□□ 0.41
THBS1P07996 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
THBS1P07996 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.61■□□□□ 0.41
THBS1P07996 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
THBS1P07996 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
THBS1P07996 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.61■□□□□ 0.41
THBS1P07996 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.61■□□□□ 0.41
THBS1P07996 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.61■□□□□ 0.41
THBS1P07996 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
THBS1P07996 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.61■□□□□ 0.41
THBS1P07996 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.61■□□□□ 0.41
THBS1P07996 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.61■□□□□ 0.41
THBS1P07996 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.61■□□□□ 0.41
THBS1P07996 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.61■□□□□ 0.41
THBS1P07996 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.61■□□□□ 0.41
THBS1P07996 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
THBS1P07996 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.61■□□□□ 0.41
THBS1P07996 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS1P07996 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THBS1P07996 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.6■□□□□ 0.41
THBS1P07996 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms