Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.91■□□□□ 0.3
APOC1P02654 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.91■□□□□ 0.3
APOC1P02654 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 NOC2LP1-202ENST00000452600 2235 ntBASIC16.91■□□□□ 0.3
APOC1P02654 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.91■□□□□ 0.3
APOC1P02654 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.91■□□□□ 0.3
APOC1P02654 UNC93B4-201ENST00000505679 747 ntBASIC16.91■□□□□ 0.3
APOC1P02654 KRT18P16-201ENST00000510337 1294 ntBASIC16.91■□□□□ 0.3
APOC1P02654 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.91■□□□□ 0.3
APOC1P02654 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
APOC1P02654 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.91■□□□□ 0.3
APOC1P02654 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.91■□□□□ 0.3
APOC1P02654 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC1P02654 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.91■□□□□ 0.3
APOC1P02654 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOC1P02654 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOC1P02654 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.9■□□□□ 0.3
APOC1P02654 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOC1P02654 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOC1P02654 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOC1P02654 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
APOC1P02654 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOC1P02654 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOC1P02654 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.9■□□□□ 0.3
APOC1P02654 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOC1P02654 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOC1P02654 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
APOC1P02654 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.9■□□□□ 0.3
APOC1P02654 AC090192.1-201ENST00000517740 490 ntBASIC16.9■□□□□ 0.3
APOC1P02654 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.9■□□□□ 0.3
APOC1P02654 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.9■□□□□ 0.3
APOC1P02654 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
APOC1P02654 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APOC1P02654 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.9■□□□□ 0.3
APOC1P02654 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
APOC1P02654 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOC1P02654 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOC1P02654 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOC1P02654 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
APOC1P02654 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOC1P02654 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
APOC1P02654 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
APOC1P02654 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
APOC1P02654 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.89■□□□□ 0.3
APOC1P02654 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOC1P02654 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOC1P02654 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
APOC1P02654 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
APOC1P02654 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APOC1P02654 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOC1P02654 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOC1P02654 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOC1P02654 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOC1P02654 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APOC1P02654 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOC1P02654 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.89■□□□□ 0.29
APOC1P02654 POM121L13P-201ENST00000422362 380 ntBASIC16.89■□□□□ 0.29
APOC1P02654 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
APOC1P02654 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.89■□□□□ 0.29
APOC1P02654 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.89■□□□□ 0.29
APOC1P02654 AC098934.4-201ENST00000564127 592 ntBASIC16.89■□□□□ 0.29
APOC1P02654 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.89■□□□□ 0.29
APOC1P02654 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
APOC1P02654 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOC1P02654 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
APOC1P02654 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOC1P02654 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
APOC1P02654 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOC1P02654 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
APOC1P02654 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOC1P02654 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOC1P02654 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOC1P02654 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.88■□□□□ 0.29
APOC1P02654 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
APOC1P02654 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.88■□□□□ 0.29
APOC1P02654 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOC1P02654 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.88■□□□□ 0.29
APOC1P02654 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOC1P02654 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOC1P02654 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOC1P02654 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
APOC1P02654 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
APOC1P02654 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.88■□□□□ 0.29
APOC1P02654 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APOC1P02654 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.88■□□□□ 0.29
APOC1P02654 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.88■□□□□ 0.29
APOC1P02654 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.88■□□□□ 0.29
APOC1P02654 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms