Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQA2P01906 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 AC133041.1-202ENST00000642053 222 ntBASIC17.19■□□□□ 0.34
HLA-DQA2P01906 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 KRT8P8-201ENST00000434750 1448 ntBASIC17.19■□□□□ 0.34
HLA-DQA2P01906 TEX21P-204ENST00000641479 1693 ntBASIC17.19■□□□□ 0.34
HLA-DQA2P01906 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA2P01906 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 AC093503.3-201ENST00000624917 2352 ntBASIC17.18■□□□□ 0.34
HLA-DQA2P01906 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.18■□□□□ 0.34
HLA-DQA2P01906 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 AC083880.1-201ENST00000608266 535 ntBASIC17.18■□□□□ 0.34
HLA-DQA2P01906 AC120498.8-201ENST00000614275 531 ntBASIC17.18■□□□□ 0.34
HLA-DQA2P01906 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 AL161938.1-201ENST00000569833 2180 ntBASIC17.18■□□□□ 0.34
HLA-DQA2P01906 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA2P01906 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 AC141586.3-201ENST00000562166 1838 ntBASIC17.17■□□□□ 0.34
HLA-DQA2P01906 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms