Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
IFNB1P01574 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IFNB1P01574 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
IFNB1P01574 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
IFNB1P01574 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.81■□□□□ 0.76
IFNB1P01574 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
IFNB1P01574 TUBB8P6-201ENST00000436895 1288 ntBASIC19.81■□□□□ 0.76
IFNB1P01574 AC069152.1-201ENST00000438030 544 ntBASIC19.81■□□□□ 0.76
IFNB1P01574 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.81■□□□□ 0.76
IFNB1P01574 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.81■□□□□ 0.76
IFNB1P01574 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.81■□□□□ 0.76
IFNB1P01574 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.81■□□□□ 0.76
IFNB1P01574 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
IFNB1P01574 AC092666.2-201ENST00000613287 246 ntBASIC19.81■□□□□ 0.76
IFNB1P01574 AL121829.2-201ENST00000620908 328 ntBASIC19.81■□□□□ 0.76
IFNB1P01574 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.81■□□□□ 0.76
IFNB1P01574 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IFNB1P01574 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
IFNB1P01574 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IFNB1P01574 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.81■□□□□ 0.76
IFNB1P01574 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IFNB1P01574 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IFNB1P01574 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
IFNB1P01574 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IFNB1P01574 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
IFNB1P01574 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IFNB1P01574 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IFNB1P01574 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IFNB1P01574 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.81■□□□□ 0.76
IFNB1P01574 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
IFNB1P01574 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.8■□□□□ 0.76
IFNB1P01574 BCL2-203ENST00000589955 5011 ntBASIC19.8■□□□□ 0.76
IFNB1P01574 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
IFNB1P01574 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
IFNB1P01574 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IFNB1P01574 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.8■□□□□ 0.76
IFNB1P01574 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
IFNB1P01574 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
IFNB1P01574 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IFNB1P01574 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
IFNB1P01574 KRT18P16-201ENST00000510337 1294 ntBASIC19.8■□□□□ 0.76
IFNB1P01574 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
IFNB1P01574 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.8■□□□□ 0.76
IFNB1P01574 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
IFNB1P01574 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.8■□□□□ 0.76
IFNB1P01574 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.8■□□□□ 0.76
IFNB1P01574 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.8■□□□□ 0.76
IFNB1P01574 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.8■□□□□ 0.76
IFNB1P01574 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
IFNB1P01574 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.8■□□□□ 0.76
IFNB1P01574 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.8■□□□□ 0.76
IFNB1P01574 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
IFNB1P01574 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IFNB1P01574 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
IFNB1P01574 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IFNB1P01574 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
IFNB1P01574 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
IFNB1P01574 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IFNB1P01574 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFNB1P01574 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFNB1P01574 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
IFNB1P01574 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.79■□□□□ 0.76
IFNB1P01574 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.79■□□□□ 0.76
IFNB1P01574 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
IFNB1P01574 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.79■□□□□ 0.76
IFNB1P01574 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.79■□□□□ 0.76
IFNB1P01574 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IFNB1P01574 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
IFNB1P01574 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.79■□□□□ 0.76
IFNB1P01574 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.79■□□□□ 0.76
IFNB1P01574 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.79■□□□□ 0.76
IFNB1P01574 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IFNB1P01574 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.79■□□□□ 0.76
IFNB1P01574 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.79■□□□□ 0.76
IFNB1P01574 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
IFNB1P01574 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.79■□□□□ 0.76
IFNB1P01574 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFNB1P01574 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFNB1P01574 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFNB1P01574 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFNB1P01574 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
IFNB1P01574 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFNB1P01574 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
IFNB1P01574 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFNB1P01574 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IFNB1P01574 AL138781.2-201ENST00000617896 1843 ntBASIC19.79■□□□□ 0.76
IFNB1P01574 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFNB1P01574 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IFNB1P01574 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IFNB1P01574 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.78■□□□□ 0.76
IFNB1P01574 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IFNB1P01574 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
IFNB1P01574 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.78■□□□□ 0.76
IFNB1P01574 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
IFNB1P01574 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IFNB1P01574 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IFNB1P01574 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IFNB1P01574 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
IFNB1P01574 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IFNB1P01574 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms