Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TOP3BO95985 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.61■□□□□ 0.73
TOP3BO95985 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP3BO95985 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP3BO95985 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP3BO95985 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TOP3BO95985 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP3BO95985 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP3BO95985 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP3BO95985 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TOP3BO95985 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TOP3BO95985 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.6■□□□□ 0.73
TOP3BO95985 KRT16P6-202ENST00000425692 1426 ntBASIC19.6■□□□□ 0.73
TOP3BO95985 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP3BO95985 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP3BO95985 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP3BO95985 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
TOP3BO95985 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TOP3BO95985 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TOP3BO95985 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TOP3BO95985 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.6■□□□□ 0.73
TOP3BO95985 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TOP3BO95985 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.6■□□□□ 0.73
TOP3BO95985 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP3BO95985 AL390955.1-201ENST00000428694 934 ntBASIC19.6■□□□□ 0.73
TOP3BO95985 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.6■□□□□ 0.73
TOP3BO95985 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TOP3BO95985 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.6■□□□□ 0.73
TOP3BO95985 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP3BO95985 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.6■□□□□ 0.73
TOP3BO95985 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.6■□□□□ 0.73
TOP3BO95985 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP3BO95985 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP3BO95985 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP3BO95985 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP3BO95985 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.6■□□□□ 0.73
TOP3BO95985 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP3BO95985 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP3BO95985 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP3BO95985 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
TOP3BO95985 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.59■□□□□ 0.73
TOP3BO95985 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP3BO95985 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP3BO95985 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.59■□□□□ 0.73
TOP3BO95985 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.59■□□□□ 0.73
TOP3BO95985 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.59■□□□□ 0.73
TOP3BO95985 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TOP3BO95985 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP3BO95985 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TOP3BO95985 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP3BO95985 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TOP3BO95985 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP3BO95985 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TOP3BO95985 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.59■□□□□ 0.73
TOP3BO95985 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TOP3BO95985 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP3BO95985 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.59■□□□□ 0.73
TOP3BO95985 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.59■□□□□ 0.73
TOP3BO95985 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TOP3BO95985 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
TOP3BO95985 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.58■□□□□ 0.73
TOP3BO95985 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TOP3BO95985 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.58■□□□□ 0.73
TOP3BO95985 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
TOP3BO95985 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TOP3BO95985 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TOP3BO95985 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TOP3BO95985 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TOP3BO95985 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.58■□□□□ 0.72
TOP3BO95985 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.58■□□□□ 0.72
TOP3BO95985 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.58■□□□□ 0.72
TOP3BO95985 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.58■□□□□ 0.72
TOP3BO95985 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.58■□□□□ 0.72
TOP3BO95985 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.58■□□□□ 0.72
TOP3BO95985 REXO1L10P-201ENST00000615707 1290 ntBASIC19.58■□□□□ 0.72
TOP3BO95985 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.58■□□□□ 0.72
TOP3BO95985 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.58■□□□□ 0.72
TOP3BO95985 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TOP3BO95985 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TOP3BO95985 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TOP3BO95985 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.58■□□□□ 0.72
TOP3BO95985 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.58■□□□□ 0.72
TOP3BO95985 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TOP3BO95985 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TOP3BO95985 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.58■□□□□ 0.72
TOP3BO95985 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TOP3BO95985 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.58■□□□□ 0.72
TOP3BO95985 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TOP3BO95985 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.57■□□□□ 0.72
TOP3BO95985 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.57■□□□□ 0.72
TOP3BO95985 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TOP3BO95985 AP001271.2-201ENST00000624018 1556 ntBASIC19.57■□□□□ 0.72
TOP3BO95985 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP3BO95985 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP3BO95985 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP3BO95985 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.57■□□□□ 0.72
TOP3BO95985 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP3BO95985 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP3BO95985 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP3BO95985 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms