Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN1O95832 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLDN1O95832 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN1O95832 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CLDN1O95832 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CLDN1O95832 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLDN1O95832 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CLDN1O95832 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLDN1O95832 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN1O95832 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN1O95832 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 UNC93B7-201ENST00000509439 705 ntBASIC17.09■□□□□ 0.33
CLDN1O95832 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN1O95832 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.09■□□□□ 0.33
CLDN1O95832 CKBP1-201ENST00000565489 1086 ntBASIC17.09■□□□□ 0.33
CLDN1O95832 HLA-A-209ENST00000638375 975 ntBASIC17.09■□□□□ 0.33
CLDN1O95832 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN1O95832 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN1O95832 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN1O95832 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CLDN1O95832 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN1O95832 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN1O95832 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN1O95832 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN1O95832 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CLDN1O95832 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN1O95832 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN1O95832 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN1O95832 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CLDN1O95832 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN1O95832 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN1O95832 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.08■□□□□ 0.32
CLDN1O95832 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.08■□□□□ 0.32
CLDN1O95832 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN1O95832 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.08■□□□□ 0.32
CLDN1O95832 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN1O95832 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN1O95832 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CLDN1O95832 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN1O95832 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN1O95832 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN1O95832 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN1O95832 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CLDN1O95832 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CLDN1O95832 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN1O95832 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CLDN1O95832 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN1O95832 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN1O95832 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN1O95832 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN1O95832 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN1O95832 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN1O95832 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN1O95832 KRT8P17-201ENST00000453110 1448 ntBASIC17.07■□□□□ 0.32
CLDN1O95832 LINC01311-201ENST00000565162 1445 ntBASIC17.07■□□□□ 0.32
CLDN1O95832 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN1O95832 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN1O95832 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN1O95832 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.07■□□□□ 0.32
CLDN1O95832 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLDN1O95832 AL022342.1-201ENST00000400363 863 ntBASIC17.07■□□□□ 0.32
CLDN1O95832 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN1O95832 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.07■□□□□ 0.32
CLDN1O95832 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.07■□□□□ 0.32
CLDN1O95832 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN1O95832 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN1O95832 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLDN1O95832 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN1O95832 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.07■□□□□ 0.32
CLDN1O95832 PLK5-205ENST00000642079 1969 ntBASIC17.07■□□□□ 0.32
CLDN1O95832 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.07■□□□□ 0.32
CLDN1O95832 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLDN1O95832 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN1O95832 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN1O95832 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN1O95832 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN1O95832 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN1O95832 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLDN1O95832 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
CLDN1O95832 TFP1-202ENST00000475455 1573 ntBASIC17.06■□□□□ 0.32
CLDN1O95832 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN1O95832 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN1O95832 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN1O95832 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms