Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VAPBO95292 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
VAPBO95292 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
VAPBO95292 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.25■□□□□ 0.67
VAPBO95292 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAPBO95292 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VAPBO95292 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
VAPBO95292 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAPBO95292 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAPBO95292 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
VAPBO95292 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAPBO95292 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
VAPBO95292 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VAPBO95292 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAPBO95292 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
VAPBO95292 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
VAPBO95292 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAPBO95292 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.25■□□□□ 0.67
VAPBO95292 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.25■□□□□ 0.67
VAPBO95292 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAPBO95292 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAPBO95292 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
VAPBO95292 AC239809.2-201ENST00000415381 517 ntBASIC19.25■□□□□ 0.67
VAPBO95292 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.25■□□□□ 0.67
VAPBO95292 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAPBO95292 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.25■□□□□ 0.67
VAPBO95292 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.25■□□□□ 0.67
VAPBO95292 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.25■□□□□ 0.67
VAPBO95292 IRX1P1-201ENST00000438849 1838 ntBASIC19.25■□□□□ 0.67
VAPBO95292 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
VAPBO95292 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
VAPBO95292 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VAPBO95292 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
VAPBO95292 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAPBO95292 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.25■□□□□ 0.67
VAPBO95292 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAPBO95292 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAPBO95292 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAPBO95292 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAPBO95292 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAPBO95292 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAPBO95292 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
VAPBO95292 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAPBO95292 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAPBO95292 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.24■□□□□ 0.67
VAPBO95292 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.24■□□□□ 0.67
VAPBO95292 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.24■□□□□ 0.67
VAPBO95292 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
VAPBO95292 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.24■□□□□ 0.67
VAPBO95292 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.24■□□□□ 0.67
VAPBO95292 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
VAPBO95292 HLA-A-209ENST00000638375 975 ntBASIC19.24■□□□□ 0.67
VAPBO95292 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VAPBO95292 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAPBO95292 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.24■□□□□ 0.67
VAPBO95292 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.24■□□□□ 0.67
VAPBO95292 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.24■□□□□ 0.67
VAPBO95292 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
VAPBO95292 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.24■□□□□ 0.67
VAPBO95292 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.24■□□□□ 0.67
VAPBO95292 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAPBO95292 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAPBO95292 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAPBO95292 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
VAPBO95292 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAPBO95292 AC006333.2-201ENST00000607957 2099 ntBASIC19.23■□□□□ 0.67
VAPBO95292 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.23■□□□□ 0.67
VAPBO95292 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.23■□□□□ 0.67
VAPBO95292 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAPBO95292 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAPBO95292 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
VAPBO95292 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VAPBO95292 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.23■□□□□ 0.67
VAPBO95292 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.23■□□□□ 0.67
VAPBO95292 CD99P1-205ENST00000527459 561 ntBASIC19.23■□□□□ 0.67
VAPBO95292 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
VAPBO95292 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VAPBO95292 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.23■□□□□ 0.67
VAPBO95292 AC006058.3-201ENST00000606217 1069 ntBASIC19.23■□□□□ 0.67
VAPBO95292 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAPBO95292 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.23■□□□□ 0.67
VAPBO95292 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.23■□□□□ 0.67
VAPBO95292 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAPBO95292 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.23■□□□□ 0.67
VAPBO95292 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.23■□□□□ 0.67
VAPBO95292 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAPBO95292 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAPBO95292 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAPBO95292 FP475955.4-201ENST00000623131 1990 ntBASIC19.23■□□□□ 0.67
VAPBO95292 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
VAPBO95292 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAPBO95292 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.22■□□□□ 0.67
VAPBO95292 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.22■□□□□ 0.67
VAPBO95292 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
VAPBO95292 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAPBO95292 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAPBO95292 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAPBO95292 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAPBO95292 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.22■□□□□ 0.67
VAPBO95292 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms