Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFA3O95167 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NDUFA3O95167 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.31■□□□□ 0.04
NDUFA3O95167 AC012618.2-201ENST00000428058 849 ntBASIC15.31■□□□□ 0.04
NDUFA3O95167 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.31■□□□□ 0.04
NDUFA3O95167 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.31■□□□□ 0.04
NDUFA3O95167 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
NDUFA3O95167 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NDUFA3O95167 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFA3O95167 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFA3O95167 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
NDUFA3O95167 HCG11-201ENST00000411553 5696 ntBASIC15.31■□□□□ 0.04
NDUFA3O95167 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NDUFA3O95167 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.31■□□□□ 0.04
NDUFA3O95167 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFA3O95167 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA3O95167 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA3O95167 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA3O95167 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA3O95167 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA3O95167 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA3O95167 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NDUFA3O95167 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.3■□□□□ 0.04
NDUFA3O95167 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFA3O95167 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFA3O95167 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
NDUFA3O95167 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA3O95167 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFA3O95167 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFA3O95167 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.3■□□□□ 0.04
NDUFA3O95167 AIRN-201ENST00000601203 4374 ntBASIC15.3■□□□□ 0.04
NDUFA3O95167 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA3O95167 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.3■□□□□ 0.04
NDUFA3O95167 AL031985.4-201ENST00000642138 673 ntBASIC15.3■□□□□ 0.04
NDUFA3O95167 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NDUFA3O95167 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA3O95167 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA3O95167 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA3O95167 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFA3O95167 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA3O95167 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA3O95167 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.29■□□□□ 0.04
NDUFA3O95167 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA3O95167 BX323043.1-201ENST00000641006 1765 ntBASIC15.29■□□□□ 0.04
NDUFA3O95167 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
NDUFA3O95167 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA3O95167 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA3O95167 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA3O95167 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.29■□□□□ 0.04
NDUFA3O95167 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NDUFA3O95167 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.29■□□□□ 0.04
NDUFA3O95167 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA3O95167 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.29■□□□□ 0.04
NDUFA3O95167 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA3O95167 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA3O95167 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA3O95167 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA3O95167 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.29■□□□□ 0.04
NDUFA3O95167 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA3O95167 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NDUFA3O95167 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA3O95167 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NDUFA3O95167 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA3O95167 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA3O95167 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA3O95167 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.29■□□□□ 0.04
NDUFA3O95167 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NDUFA3O95167 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.29■□□□□ 0.04
NDUFA3O95167 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.29■□□□□ 0.04
NDUFA3O95167 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.29■□□□□ 0.04
NDUFA3O95167 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.29■□□□□ 0.04
NDUFA3O95167 AP001412.1-201ENST00000608405 714 ntBASIC15.29■□□□□ 0.04
NDUFA3O95167 CR392000.1-201ENST00000624770 1228 ntBASIC15.29■□□□□ 0.04
NDUFA3O95167 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.29■□□□□ 0.04
NDUFA3O95167 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA3O95167 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
NDUFA3O95167 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms