Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AP000347.1-202ENST00000435868 847 ntBASIC29.93■■■□□ 2.38
PCF11O94913 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC29.93■■■□□ 2.38
PCF11O94913 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
PCF11O94913 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
PCF11O94913 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC29.93■■■□□ 2.38
PCF11O94913 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC29.93■■■□□ 2.38
PCF11O94913 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
PCF11O94913 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
PCF11O94913 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
PCF11O94913 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
PCF11O94913 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
PCF11O94913 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC29.92■■■□□ 2.38
PCF11O94913 AC246785.2-201ENST00000432512 513 ntBASIC29.92■■■□□ 2.38
PCF11O94913 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC29.92■■■□□ 2.38
PCF11O94913 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
PCF11O94913 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC29.92■■■□□ 2.38
PCF11O94913 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC29.92■■■□□ 2.38
PCF11O94913 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
PCF11O94913 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC29.91■■■□□ 2.38
PCF11O94913 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
PCF11O94913 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
PCF11O94913 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC29.91■■■□□ 2.38
PCF11O94913 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
PCF11O94913 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC29.91■■■□□ 2.38
PCF11O94913 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC29.91■■■□□ 2.38
PCF11O94913 AC004263.2-201ENST00000617183 678 ntBASIC29.91■■■□□ 2.38
PCF11O94913 AC093458.2-201ENST00000623150 629 ntBASIC29.91■■■□□ 2.38
PCF11O94913 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC29.91■■■□□ 2.38
PCF11O94913 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC29.91■■■□□ 2.38
PCF11O94913 TEX21P-204ENST00000641479 1693 ntBASIC29.91■■■□□ 2.38
PCF11O94913 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
PCF11O94913 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
PCF11O94913 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
PCF11O94913 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC29.91■■■□□ 2.38
PCF11O94913 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
PCF11O94913 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC29.91■■■□□ 2.38
PCF11O94913 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PCF11O94913 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC29.9■■■□□ 2.38
PCF11O94913 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
PCF11O94913 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PCF11O94913 DAP-202ENST00000432074 1048 ntTSL 2 BASIC29.9■■■□□ 2.38
PCF11O94913 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC29.9■■■□□ 2.38
PCF11O94913 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC29.9■■■□□ 2.38
PCF11O94913 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
PCF11O94913 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
PCF11O94913 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC29.9■■■□□ 2.38
PCF11O94913 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PCF11O94913 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC29.9■■■□□ 2.38
PCF11O94913 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC29.9■■■□□ 2.38
PCF11O94913 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
PCF11O94913 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC29.9■■■□□ 2.38
PCF11O94913 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC29.9■■■□□ 2.38
PCF11O94913 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PCF11O94913 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
PCF11O94913 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PCF11O94913 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC29.9■■■□□ 2.38
PCF11O94913 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
PCF11O94913 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC29.9■■■□□ 2.38
PCF11O94913 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC29.9■■■□□ 2.38
PCF11O94913 AC069148.1-201ENST00000608741 768 ntBASIC29.9■■■□□ 2.38
PCF11O94913 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PCF11O94913 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC29.89■■■□□ 2.38
PCF11O94913 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC29.89■■■□□ 2.38
PCF11O94913 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
PCF11O94913 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
PCF11O94913 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC29.89■■■□□ 2.38
PCF11O94913 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
PCF11O94913 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
PCF11O94913 ZNF444P1-201ENST00000559497 298 ntBASIC29.89■■■□□ 2.38
PCF11O94913 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC29.89■■■□□ 2.38
PCF11O94913 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
PCF11O94913 USP48-205ENST00000421625 2818 ntTSL 2 BASIC29.89■■■□□ 2.37
PCF11O94913 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.37
PCF11O94913 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC29.88■■■□□ 2.37
PCF11O94913 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
PCF11O94913 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC29.88■■■□□ 2.37
PCF11O94913 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC29.88■■■□□ 2.37
PCF11O94913 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
PCF11O94913 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC29.88■■■□□ 2.37
PCF11O94913 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
PCF11O94913 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC29.88■■■□□ 2.37
PCF11O94913 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC29.88■■■□□ 2.37
PCF11O94913 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
PCF11O94913 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC29.88■■■□□ 2.37
PCF11O94913 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
PCF11O94913 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC29.88■■■□□ 2.37
PCF11O94913 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC29.88■■■□□ 2.37
PCF11O94913 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
PCF11O94913 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
PCF11O94913 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
PCF11O94913 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC29.87■■■□□ 2.37
PCF11O94913 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
PCF11O94913 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC29.87■■■□□ 2.37
PCF11O94913 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC29.87■■■□□ 2.37
PCF11O94913 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC29.87■■■□□ 2.37
PCF11O94913 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
PCF11O94913 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC29.87■■■□□ 2.37
PCF11O94913 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
PCF11O94913 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC29.87■■■□□ 2.37
PCF11O94913 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms