Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
OPHN1O60890 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
OPHN1O60890 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
OPHN1O60890 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
OPHN1O60890 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.97■□□□□ 0.79
OPHN1O60890 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.96■□□□□ 0.79
OPHN1O60890 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
OPHN1O60890 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.96■□□□□ 0.79
OPHN1O60890 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
OPHN1O60890 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
OPHN1O60890 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
OPHN1O60890 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
OPHN1O60890 ARMC10P1-201ENST00000313754 855 ntBASIC19.96■□□□□ 0.79
OPHN1O60890 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
OPHN1O60890 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
OPHN1O60890 AL355355.2-201ENST00000442321 338 ntBASIC19.96■□□□□ 0.79
OPHN1O60890 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
OPHN1O60890 RN7SL850P-201ENST00000579959 291 ntBASIC19.96■□□□□ 0.79
OPHN1O60890 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.96■□□□□ 0.79
OPHN1O60890 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
OPHN1O60890 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.96■□□□□ 0.79
OPHN1O60890 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
OPHN1O60890 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
OPHN1O60890 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.96■□□□□ 0.79
OPHN1O60890 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
OPHN1O60890 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.96■□□□□ 0.79
OPHN1O60890 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.95■□□□□ 0.78
OPHN1O60890 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
OPHN1O60890 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
OPHN1O60890 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
OPHN1O60890 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
OPHN1O60890 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.95■□□□□ 0.78
OPHN1O60890 MMP23A-201ENST00000234610 1017 ntBASIC19.95■□□□□ 0.78
OPHN1O60890 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.95■□□□□ 0.78
OPHN1O60890 AP003071.4-201ENST00000562276 1284 ntBASIC19.95■□□□□ 0.78
OPHN1O60890 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
OPHN1O60890 AL353708.3-201ENST00000610272 989 ntBASIC19.95■□□□□ 0.78
OPHN1O60890 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
OPHN1O60890 AL032819.2-201ENST00000624543 2162 ntBASIC19.95■□□□□ 0.78
OPHN1O60890 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
OPHN1O60890 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
OPHN1O60890 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
OPHN1O60890 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
OPHN1O60890 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.94■□□□□ 0.78
OPHN1O60890 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
OPHN1O60890 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
OPHN1O60890 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
OPHN1O60890 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
OPHN1O60890 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
OPHN1O60890 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
OPHN1O60890 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
OPHN1O60890 BX323043.1-201ENST00000641006 1765 ntBASIC19.94■□□□□ 0.78
OPHN1O60890 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
OPHN1O60890 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.94■□□□□ 0.78
OPHN1O60890 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.94■□□□□ 0.78
OPHN1O60890 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
OPHN1O60890 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
OPHN1O60890 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.94■□□□□ 0.78
OPHN1O60890 KRT18P35-201ENST00000510488 1269 ntBASIC19.94■□□□□ 0.78
OPHN1O60890 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
OPHN1O60890 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.94■□□□□ 0.78
OPHN1O60890 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
OPHN1O60890 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
OPHN1O60890 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
OPHN1O60890 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
OPHN1O60890 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
OPHN1O60890 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.94■□□□□ 0.78
OPHN1O60890 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
OPHN1O60890 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
OPHN1O60890 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
OPHN1O60890 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
OPHN1O60890 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
OPHN1O60890 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
OPHN1O60890 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.93■□□□□ 0.78
OPHN1O60890 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
OPHN1O60890 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.93■□□□□ 0.78
OPHN1O60890 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
OPHN1O60890 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
OPHN1O60890 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.93■□□□□ 0.78
OPHN1O60890 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
OPHN1O60890 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
OPHN1O60890 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.93■□□□□ 0.78
OPHN1O60890 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.93■□□□□ 0.78
OPHN1O60890 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
OPHN1O60890 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.93■□□□□ 0.78
OPHN1O60890 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
OPHN1O60890 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.93■□□□□ 0.78
OPHN1O60890 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
OPHN1O60890 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
OPHN1O60890 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
OPHN1O60890 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
OPHN1O60890 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.93■□□□□ 0.78
OPHN1O60890 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.92■□□□□ 0.78
OPHN1O60890 AP006587.1-201ENST00000534129 1502 ntBASIC19.92■□□□□ 0.78
OPHN1O60890 AC018445.3-201ENST00000624177 1945 ntBASIC19.92■□□□□ 0.78
OPHN1O60890 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
OPHN1O60890 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
OPHN1O60890 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.92■□□□□ 0.78
OPHN1O60890 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
OPHN1O60890 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms