Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 HLA-G-203ENST00000376818 1127 ntBASIC18.99■□□□□ 0.63
KLHL41O60662 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.99■□□□□ 0.63
KLHL41O60662 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
KLHL41O60662 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
KLHL41O60662 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.99■□□□□ 0.63
KLHL41O60662 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
KLHL41O60662 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.99■□□□□ 0.63
KLHL41O60662 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.99■□□□□ 0.63
KLHL41O60662 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KLHL41O60662 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KLHL41O60662 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.99■□□□□ 0.63
KLHL41O60662 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.98■□□□□ 0.63
KLHL41O60662 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.98■□□□□ 0.63
KLHL41O60662 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
KLHL41O60662 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
KLHL41O60662 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.98■□□□□ 0.63
KLHL41O60662 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 AC009113.1-201ENST00000570267 2443 ntBASIC18.98■□□□□ 0.63
KLHL41O60662 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.98■□□□□ 0.63
KLHL41O60662 AC008550.1-201ENST00000511500 884 ntBASIC18.98■□□□□ 0.63
KLHL41O60662 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.98■□□□□ 0.63
KLHL41O60662 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.98■□□□□ 0.63
KLHL41O60662 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.98■□□□□ 0.63
KLHL41O60662 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.98■□□□□ 0.63
KLHL41O60662 AC008403.3-201ENST00000598924 454 ntBASIC18.98■□□□□ 0.63
KLHL41O60662 AL359736.2-201ENST00000621992 437 ntBASIC18.98■□□□□ 0.63
KLHL41O60662 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.98■□□□□ 0.63
KLHL41O60662 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
KLHL41O60662 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
KLHL41O60662 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.98■□□□□ 0.63
KLHL41O60662 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
KLHL41O60662 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KLHL41O60662 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KLHL41O60662 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KLHL41O60662 AC006333.2-201ENST00000607957 2099 ntBASIC18.97■□□□□ 0.63
KLHL41O60662 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
KLHL41O60662 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
KLHL41O60662 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KLHL41O60662 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
KLHL41O60662 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.97■□□□□ 0.63
KLHL41O60662 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.97■□□□□ 0.63
KLHL41O60662 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.97■□□□□ 0.63
KLHL41O60662 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KLHL41O60662 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.97■□□□□ 0.63
KLHL41O60662 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KLHL41O60662 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
KLHL41O60662 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KLHL41O60662 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KLHL41O60662 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KLHL41O60662 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.97■□□□□ 0.63
KLHL41O60662 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.97■□□□□ 0.63
KLHL41O60662 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
KLHL41O60662 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.97■□□□□ 0.63
KLHL41O60662 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
KLHL41O60662 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
KLHL41O60662 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.97■□□□□ 0.63
KLHL41O60662 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KLHL41O60662 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.97■□□□□ 0.63
KLHL41O60662 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
KLHL41O60662 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KLHL41O60662 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KLHL41O60662 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KLHL41O60662 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.96■□□□□ 0.63
KLHL41O60662 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KLHL41O60662 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KLHL41O60662 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KLHL41O60662 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KLHL41O60662 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.96■□□□□ 0.63
KLHL41O60662 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.96■□□□□ 0.63
KLHL41O60662 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.96■□□□□ 0.63
KLHL41O60662 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.96■□□□□ 0.63
KLHL41O60662 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KLHL41O60662 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KLHL41O60662 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.96■□□□□ 0.63
KLHL41O60662 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KLHL41O60662 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KLHL41O60662 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.96■□□□□ 0.63
KLHL41O60662 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KLHL41O60662 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KLHL41O60662 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KLHL41O60662 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KLHL41O60662 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms