Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRKNO60260 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRKNO60260 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.83■□□□□ 0.45
PRKNO60260 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.83■□□□□ 0.45
PRKNO60260 CYP2D8P-201ENST00000433633 1490 ntBASIC17.83■□□□□ 0.45
PRKNO60260 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRKNO60260 AL032819.2-201ENST00000624543 2162 ntBASIC17.83■□□□□ 0.45
PRKNO60260 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.83■□□□□ 0.44
PRKNO60260 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
PRKNO60260 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRKNO60260 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.83■□□□□ 0.44
PRKNO60260 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PRKNO60260 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRKNO60260 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.83■□□□□ 0.44
PRKNO60260 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRKNO60260 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.83■□□□□ 0.44
PRKNO60260 AC097488.1-201ENST00000507834 756 ntBASIC17.83■□□□□ 0.44
PRKNO60260 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PRKNO60260 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.83■□□□□ 0.44
PRKNO60260 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.83■□□□□ 0.44
PRKNO60260 AP000692.2-201ENST00000608391 879 ntBASIC17.83■□□□□ 0.44
PRKNO60260 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.83■□□□□ 0.44
PRKNO60260 AC133561.5-201ENST00000635547 218 ntBASIC17.83■□□□□ 0.44
PRKNO60260 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRKNO60260 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRKNO60260 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRKNO60260 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PRKNO60260 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRKNO60260 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.83■□□□□ 0.44
PRKNO60260 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.83■□□□□ 0.44
PRKNO60260 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRKNO60260 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.83■□□□□ 0.44
PRKNO60260 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRKNO60260 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.83■□□□□ 0.44
PRKNO60260 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.83■□□□□ 0.44
PRKNO60260 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRKNO60260 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.82■□□□□ 0.44
PRKNO60260 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKNO60260 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKNO60260 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.82■□□□□ 0.44
PRKNO60260 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.82■□□□□ 0.44
PRKNO60260 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRKNO60260 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKNO60260 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKNO60260 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKNO60260 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.82■□□□□ 0.44
PRKNO60260 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PRKNO60260 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKNO60260 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.82■□□□□ 0.44
PRKNO60260 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PRKNO60260 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKNO60260 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKNO60260 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKNO60260 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PRKNO60260 FAM207BP-201ENST00000447172 505 ntBASIC17.82■□□□□ 0.44
PRKNO60260 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.82■□□□□ 0.44
PRKNO60260 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.82■□□□□ 0.44
PRKNO60260 DGCR10-201ENST00000609839 495 ntBASIC17.82■□□□□ 0.44
PRKNO60260 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.82■□□□□ 0.44
PRKNO60260 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRKNO60260 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.82■□□□□ 0.44
PRKNO60260 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKNO60260 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKNO60260 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKNO60260 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKNO60260 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.82■□□□□ 0.44
PRKNO60260 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PRKNO60260 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.81■□□□□ 0.44
PRKNO60260 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKNO60260 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKNO60260 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.81■□□□□ 0.44
PRKNO60260 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.81■□□□□ 0.44
PRKNO60260 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PRKNO60260 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKNO60260 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKNO60260 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKNO60260 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRKNO60260 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKNO60260 CRYGFP-201ENST00000418459 633 ntBASIC17.81■□□□□ 0.44
PRKNO60260 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.81■□□□□ 0.44
PRKNO60260 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.81■□□□□ 0.44
PRKNO60260 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.81■□□□□ 0.44
PRKNO60260 SLC25A1P4-201ENST00000567977 778 ntBASIC17.81■□□□□ 0.44
PRKNO60260 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.81■□□□□ 0.44
PRKNO60260 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
PRKNO60260 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.81■□□□□ 0.44
PRKNO60260 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PRKNO60260 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.81■□□□□ 0.44
PRKNO60260 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.81■□□□□ 0.44
PRKNO60260 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKNO60260 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PRKNO60260 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRKNO60260 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKNO60260 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKNO60260 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.8■□□□□ 0.44
PRKNO60260 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.8■□□□□ 0.44
PRKNO60260 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.8■□□□□ 0.44
PRKNO60260 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRKNO60260 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRKNO60260 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms