Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SMAD9O15198 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
SMAD9O15198 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.39■□□□□ 0.37
SMAD9O15198 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.39■□□□□ 0.37
SMAD9O15198 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SMAD9O15198 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SMAD9O15198 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.38■□□□□ 0.37
SMAD9O15198 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SMAD9O15198 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
SMAD9O15198 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
SMAD9O15198 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SMAD9O15198 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
SMAD9O15198 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SMAD9O15198 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.38■□□□□ 0.37
SMAD9O15198 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 AP002982.1-201ENST00000492365 877 ntBASIC17.38■□□□□ 0.37
SMAD9O15198 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.38■□□□□ 0.37
SMAD9O15198 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.38■□□□□ 0.37
SMAD9O15198 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.38■□□□□ 0.37
SMAD9O15198 AC233702.5-201ENST00000584107 538 ntBASIC17.38■□□□□ 0.37
SMAD9O15198 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.38■□□□□ 0.37
SMAD9O15198 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SMAD9O15198 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.38■□□□□ 0.37
SMAD9O15198 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.38■□□□□ 0.37
SMAD9O15198 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SMAD9O15198 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.38■□□□□ 0.37
SMAD9O15198 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD9O15198 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD9O15198 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.37■□□□□ 0.37
SMAD9O15198 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD9O15198 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SMAD9O15198 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.37■□□□□ 0.37
SMAD9O15198 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SMAD9O15198 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD9O15198 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SMAD9O15198 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD9O15198 AL158211.5-201ENST00000623583 2518 ntBASIC17.37■□□□□ 0.37
SMAD9O15198 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD9O15198 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.37■□□□□ 0.37
SMAD9O15198 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.37■□□□□ 0.37
SMAD9O15198 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD9O15198 MIR718-201ENST00000390190 70 ntBASIC17.37■□□□□ 0.37
SMAD9O15198 NIFKP9-201ENST00000419265 221 ntBASIC17.37■□□□□ 0.37
SMAD9O15198 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD9O15198 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD9O15198 AC093827.2-201ENST00000512654 315 ntBASIC17.37■□□□□ 0.37
SMAD9O15198 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.37■□□□□ 0.37
SMAD9O15198 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.37■□□□□ 0.37
SMAD9O15198 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD9O15198 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.37■□□□□ 0.37
SMAD9O15198 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD9O15198 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD9O15198 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD9O15198 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.37■□□□□ 0.37
SMAD9O15198 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD9O15198 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SMAD9O15198 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMAD9O15198 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SMAD9O15198 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD9O15198 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD9O15198 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD9O15198 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD9O15198 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD9O15198 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD9O15198 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.36■□□□□ 0.37
SMAD9O15198 AC098818.2-201ENST00000564925 2320 ntBASIC17.36■□□□□ 0.37
SMAD9O15198 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.36■□□□□ 0.37
SMAD9O15198 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.36■□□□□ 0.37
SMAD9O15198 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.36■□□□□ 0.37
SMAD9O15198 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SMAD9O15198 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.36■□□□□ 0.37
SMAD9O15198 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.36■□□□□ 0.37
SMAD9O15198 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.36■□□□□ 0.37
SMAD9O15198 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.36■□□□□ 0.37
SMAD9O15198 HLA-A-209ENST00000638375 975 ntBASIC17.36■□□□□ 0.37
SMAD9O15198 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.36■□□□□ 0.37
SMAD9O15198 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
SMAD9O15198 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD9O15198 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD9O15198 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms