Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.71□□□□□ -0.05
NDUFA4O00483 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA4O00483 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.71□□□□□ -0.05
NDUFA4O00483 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
NDUFA4O00483 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA4O00483 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.06
NDUFA4O00483 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA4O00483 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA4O00483 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
NDUFA4O00483 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA4O00483 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
NDUFA4O00483 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA4O00483 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
NDUFA4O00483 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA4O00483 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA4O00483 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA4O00483 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA4O00483 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA4O00483 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA4O00483 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA4O00483 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA4O00483 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA4O00483 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA4O00483 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA4O00483 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NDUFA4O00483 AC004980.1-204ENST00000429707 299 ntBASIC14.7□□□□□ -0.06
NDUFA4O00483 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.7□□□□□ -0.06
NDUFA4O00483 AL158047.1-201ENST00000445918 881 ntBASIC14.7□□□□□ -0.06
NDUFA4O00483 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.7□□□□□ -0.06
NDUFA4O00483 AC098590.1-201ENST00000468126 897 ntBASIC14.7□□□□□ -0.06
NDUFA4O00483 RPS2P4-201ENST00000476944 856 ntBASIC14.7□□□□□ -0.06
NDUFA4O00483 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.7□□□□□ -0.06
NDUFA4O00483 Z85996.1-201ENST00000494644 937 ntBASIC14.7□□□□□ -0.06
NDUFA4O00483 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
NDUFA4O00483 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.7□□□□□ -0.06
NDUFA4O00483 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.7□□□□□ -0.06
NDUFA4O00483 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NDUFA4O00483 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA4O00483 AL031985.4-201ENST00000642138 673 ntBASIC14.7□□□□□ -0.06
NDUFA4O00483 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA4O00483 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.7□□□□□ -0.06
NDUFA4O00483 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA4O00483 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NDUFA4O00483 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.7□□□□□ -0.06
NDUFA4O00483 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA4O00483 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA4O00483 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NDUFA4O00483 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.69□□□□□ -0.06
NDUFA4O00483 FEM1AP3-201ENST00000403722 1741 ntBASIC14.69□□□□□ -0.06
NDUFA4O00483 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.69□□□□□ -0.06
NDUFA4O00483 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.69□□□□□ -0.06
NDUFA4O00483 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.69□□□□□ -0.06
NDUFA4O00483 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NDUFA4O00483 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.69□□□□□ -0.06
NDUFA4O00483 AL161938.1-201ENST00000569833 2180 ntBASIC14.69□□□□□ -0.06
NDUFA4O00483 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.69□□□□□ -0.06
NDUFA4O00483 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.69□□□□□ -0.06
NDUFA4O00483 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.69□□□□□ -0.06
NDUFA4O00483 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.69□□□□□ -0.06
NDUFA4O00483 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NDUFA4O00483 AP001412.1-201ENST00000608405 714 ntBASIC14.69□□□□□ -0.06
NDUFA4O00483 CR392000.1-201ENST00000624770 1228 ntBASIC14.69□□□□□ -0.06
NDUFA4O00483 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.69□□□□□ -0.06
NDUFA4O00483 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 KRT8P41-201ENST00000533985 1514 ntBASIC14.69□□□□□ -0.06
NDUFA4O00483 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.69□□□□□ -0.06
NDUFA4O00483 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NDUFA4O00483 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NDUFA4O00483 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.69□□□□□ -0.06
NDUFA4O00483 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA4O00483 IRX1P1-201ENST00000438849 1838 ntBASIC14.69□□□□□ -0.06
NDUFA4O00483 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.69□□□□□ -0.06
NDUFA4O00483 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NDUFA4O00483 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.68□□□□□ -0.06
NDUFA4O00483 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
NDUFA4O00483 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms