Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3B1O00203 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
AP3B1O00203 AC093503.3-201ENST00000624917 2352 ntBASIC19.36■□□□□ 0.69
AP3B1O00203 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.36■□□□□ 0.69
AP3B1O00203 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
AP3B1O00203 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3B1O00203 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
AP3B1O00203 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP3B1O00203 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.35■□□□□ 0.69
AP3B1O00203 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
AP3B1O00203 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.35■□□□□ 0.69
AP3B1O00203 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3B1O00203 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3B1O00203 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
AP3B1O00203 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
AP3B1O00203 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.35■□□□□ 0.69
AP3B1O00203 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.35■□□□□ 0.69
AP3B1O00203 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP3B1O00203 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP3B1O00203 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.35■□□□□ 0.69
AP3B1O00203 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3B1O00203 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.35■□□□□ 0.69
AP3B1O00203 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.35■□□□□ 0.69
AP3B1O00203 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.35■□□□□ 0.69
AP3B1O00203 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.35■□□□□ 0.69
AP3B1O00203 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3B1O00203 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3B1O00203 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP3B1O00203 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3B1O00203 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.35■□□□□ 0.69
AP3B1O00203 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3B1O00203 AL020996.1-203ENST00000536896 2307 ntBASIC19.35■□□□□ 0.69
AP3B1O00203 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3B1O00203 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP3B1O00203 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.34■□□□□ 0.69
AP3B1O00203 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP3B1O00203 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
AP3B1O00203 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.34■□□□□ 0.69
AP3B1O00203 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3B1O00203 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
AP3B1O00203 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3B1O00203 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3B1O00203 CROCCP3-202ENST00000420820 1947 ntBASIC19.34■□□□□ 0.69
AP3B1O00203 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3B1O00203 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3B1O00203 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3B1O00203 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.34■□□□□ 0.69
AP3B1O00203 AC133681.1-201ENST00000465482 601 ntBASIC19.34■□□□□ 0.69
AP3B1O00203 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
AP3B1O00203 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.34■□□□□ 0.69
AP3B1O00203 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
AP3B1O00203 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP3B1O00203 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3B1O00203 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.34■□□□□ 0.69
AP3B1O00203 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
AP3B1O00203 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
AP3B1O00203 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP3B1O00203 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
AP3B1O00203 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP3B1O00203 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP3B1O00203 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.33■□□□□ 0.69
AP3B1O00203 AC093525.10-201ENST00000625130 1569 ntBASIC19.33■□□□□ 0.69
AP3B1O00203 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
AP3B1O00203 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3B1O00203 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3B1O00203 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3B1O00203 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3B1O00203 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3B1O00203 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3B1O00203 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.33■□□□□ 0.68
AP3B1O00203 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3B1O00203 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3B1O00203 AL049812.1-201ENST00000432563 2267 ntBASIC19.33■□□□□ 0.68
AP3B1O00203 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3B1O00203 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3B1O00203 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
AP3B1O00203 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3B1O00203 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3B1O00203 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
AP3B1O00203 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
AP3B1O00203 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
AP3B1O00203 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.33■□□□□ 0.68
AP3B1O00203 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
AP3B1O00203 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.33■□□□□ 0.68
AP3B1O00203 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3B1O00203 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP3B1O00203 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3B1O00203 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP3B1O00203 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.32■□□□□ 0.68
AP3B1O00203 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.32■□□□□ 0.68
AP3B1O00203 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.32■□□□□ 0.68
AP3B1O00203 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3B1O00203 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP3B1O00203 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3B1O00203 ESRRAP1-201ENST00000400596 1257 ntBASIC19.32■□□□□ 0.68
AP3B1O00203 KRASP1-201ENST00000407852 552 ntBASIC19.32■□□□□ 0.68
AP3B1O00203 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.32■□□□□ 0.68
AP3B1O00203 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
AP3B1O00203 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.32■□□□□ 0.68
AP3B1O00203 AL023875.1-201ENST00000640777 796 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms