Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
NPIPA2E9PIF3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NPIPA2E9PIF3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA2E9PIF3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NPIPA2E9PIF3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.46■□□□□ 0.39
NPIPA2E9PIF3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.46■□□□□ 0.39
NPIPA2E9PIF3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA2E9PIF3 AP000692.2-201ENST00000608391 879 ntBASIC17.46■□□□□ 0.39
NPIPA2E9PIF3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA2E9PIF3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA2E9PIF3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.46■□□□□ 0.39
NPIPA2E9PIF3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.46■□□□□ 0.39
NPIPA2E9PIF3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA2E9PIF3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NPIPA2E9PIF3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NPIPA2E9PIF3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
NPIPA2E9PIF3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 TERF1P1-201ENST00000311003 1181 ntBASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 LIN28AP1-201ENST00000429574 405 ntBASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 FAM207BP-201ENST00000447172 505 ntBASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 AC008040.2-201ENST00000461049 708 ntBASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 ECEL1P2-202ENST00000465689 757 ntBASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA2E9PIF3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 ATP5G1P1-201ENST00000448724 379 ntBASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 EGLN1P1-201ENST00000531623 762 ntBASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 AL445228.2-201ENST00000605589 952 ntBASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA2E9PIF3 AC125437.2-201ENST00000625180 2167 ntBASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 ARMC10P1-201ENST00000313754 855 ntBASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 AC128688.1-201ENST00000487626 519 ntBASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.43■□□□□ 0.38
NPIPA2E9PIF3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms