Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 AC233702.3-201ENST00000578656 1387 ntBASIC18.31■□□□□ 0.52
CNOT1A5YKK6 AC244015.2-201ENST00000616358 1861 ntBASIC18.31■□□□□ 0.52
CNOT1A5YKK6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 RNPS1P1-201ENST00000507437 918 ntBASIC18.3■□□□□ 0.52
CNOT1A5YKK6 AC073648.2-201ENST00000510116 352 ntBASIC18.3■□□□□ 0.52
CNOT1A5YKK6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 AL136038.4-201ENST00000603606 1261 ntBASIC18.3■□□□□ 0.52
CNOT1A5YKK6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT1A5YKK6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 MIR564-202ENST00000385049 94 ntBASIC18.29■□□□□ 0.52
CNOT1A5YKK6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT1A5YKK6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 GPAT2P1-201ENST00000444924 1672 ntBASIC18.28■□□□□ 0.52
CNOT1A5YKK6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.28■□□□□ 0.52
CNOT1A5YKK6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.28■□□□□ 0.52
CNOT1A5YKK6 AC024243.1-201ENST00000609234 778 ntBASIC18.28■□□□□ 0.52
CNOT1A5YKK6 AC148477.8-201ENST00000624298 468 ntBASIC18.28■□□□□ 0.52
CNOT1A5YKK6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
CNOT1A5YKK6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.27■□□□□ 0.52
CNOT1A5YKK6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.27■□□□□ 0.52
CNOT1A5YKK6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.27■□□□□ 0.52
CNOT1A5YKK6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.27■□□□□ 0.52
CNOT1A5YKK6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT1A5YKK6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms