Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV3S1A0A5B6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV3S1A0A5B6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 AL355472.2-201ENST00000422958 438 ntBASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 AC139713.2-201ENST00000641328 2723 ntBASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV3S1A0A5B6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms