Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.56■□□□□ 0.88
SMIM28A0A1B0GU29 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 DUX4L26-201ENST00000489078 1255 ntBASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SMIM28A0A1B0GU29 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
SMIM28A0A1B0GU29 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 AL445228.2-201ENST00000605589 952 ntBASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 AL590326.2-201ENST00000625139 305 ntBASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 AC141257.4-201ENST00000634557 245 ntBASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 AC136944.6-201ENST00000634818 245 ntBASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 TEX21P-204ENST00000641479 1693 ntBASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM28A0A1B0GU29 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms