Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRGV4A0A0C4DH28 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
TRGV4A0A0C4DH28 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 ESRRAP1-201ENST00000400596 1257 ntBASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRGV4A0A0C4DH28 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 NBPF21P-201ENST00000425093 1451 ntBASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 CD99P1-205ENST00000527459 561 ntBASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 AL032819.2-201ENST00000624543 2162 ntBASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRGV4A0A0C4DH28 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 AC239809.2-201ENST00000415381 517 ntBASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 KRT18P16-201ENST00000510337 1294 ntBASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 AC008403.3-201ENST00000598924 454 ntBASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 AC069544.1-201ENST00000609399 999 ntBASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 ZNF815P-204ENST00000434898 1737 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms