Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 TSPY23P-201ENST00000440136 739 ntBASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 LINC01238-205ENST00000567549 1107 ntBASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 NTF6B-201ENST00000591913 560 ntBASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 AC141257.4-201ENST00000634557 245 ntBASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 AC136944.6-201ENST00000634818 245 ntBASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 AC117947.1-201ENST00000427448 529 ntBASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 COX11P1-201ENST00000489116 835 ntBASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 AC139887.4-201ENST00000607877 719 ntBASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.18■□□□□ 0.34
TRGV5A0A0B4J1U4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 PCDHAC2-203ENST00000615316 3011 ntBASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 WWOX-216ENST00000569818 525 ntBASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV5A0A0B4J1U4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms