Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.14■□□□□ 0.5
CCDC187A0A096LP49 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 AIRN-201ENST00000601203 4374 ntBASIC18.14■□□□□ 0.49
CCDC187A0A096LP49 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 AL691432.2-201ENST00000607222 2038 ntBASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 HBZP1-201ENST00000354915 429 ntBASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC187A0A096LP49 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 AL645929.1-201ENST00000420084 975 ntBASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 AC012313.10-201ENST00000623509 926 ntBASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC187A0A096LP49 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 SPDYE13P-201ENST00000445314 798 ntBASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 RASA4DP-201ENST00000460726 1199 ntBASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms