Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
TM9SF2Q99805 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF2Q99805 NEAT1-202ENST00000501122 22743 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
TM9SF2Q99805 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF2Q99805 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF2Q99805 MIR133B-201ENST00000362210 119 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 Y_RNA.128-201ENST00000363391 112 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 SNORA74A-201ENST00000364089 198 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 RNY4P36-201ENST00000391116 96 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 MTCYBP4-201ENST00000401524 249 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 AL139039.1-201ENST00000401900 692 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
TM9SF2Q99805 MIR1271-201ENST00000408537 86 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 RNU6-370P-201ENST00000411008 104 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 OR2AH1P-201ENST00000425717 928 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 AC093655.2-201ENST00000425735 631 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.85□□□□□ -1.63
TM9SF2Q99805 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.85□□□□□ -1.63
TM9SF2Q99805 AC079168.1-201ENST00000458741 345 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 RPS4XP1-201ENST00000482189 787 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 GMPSP1-201ENST00000514075 579 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.85□□□□□ -1.63
TM9SF2Q99805 RNU6-352P-201ENST00000516908 107 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 RNA5SP454-201ENST00000517231 127 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 RNU4-60P-201ENST00000517239 135 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 AC018630.1-201ENST00000541376 925 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.85□□□□□ -1.63
TM9SF2Q99805 AL121603.1-201ENST00000553815 142 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 BNIP3P5-201ENST00000562290 498 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.85□□□□□ -1.63
TM9SF2Q99805 MIR3171-201ENST00000584270 74 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.85□□□□□ -1.63
TM9SF2Q99805 DPPA3P3-201ENST00000603842 430 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 AL162730.1-201ENST00000605734 292 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 HMGN2P28-201ENST00000606102 262 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 AC006065.5-201ENST00000623427 349 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 AC073869.8-201ENST00000641806 335 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF2Q99805 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.85□□□□□ -1.63
TM9SF2Q99805 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TM9SF2Q99805 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 AC139769.1-204ENST00000472297 1931 ntBASIC4.85□□□□□ -1.63
TM9SF2Q99805 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.85□□□□□ -1.63
TM9SF2Q99805 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.85□□□□□ -1.63
TM9SF2Q99805 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF2Q99805 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF2Q99805 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TM9SF2Q99805 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
TM9SF2Q99805 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
TM9SF2Q99805 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.84□□□□□ -1.63
TM9SF2Q99805 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.84□□□□□ -1.63
TM9SF2Q99805 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
TM9SF2Q99805 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
TM9SF2Q99805 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
TM9SF2Q99805 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF2Q99805 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
TM9SF2Q99805 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF2Q99805 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF2Q99805 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF2Q99805 RNU6-254P-201ENST00000363377 107 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
TM9SF2Q99805 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF2Q99805 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TM9SF2Q99805 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TM9SF2Q99805 AL133388.1-201ENST00000404509 287 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 AC092809.3-201ENST00000415453 231 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 AC108075.1-201ENST00000424692 529 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF2Q99805 RPL23AP89-201ENST00000439324 255 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.84□□□□□ -1.63
TM9SF2Q99805 GAPDHP25-201ENST00000447061 1001 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 AC108161.1-201ENST00000461060 402 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 DYNLL1P5-201ENST00000467158 270 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 AP001086.1-201ENST00000494882 321 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 AC072052.1-201ENST00000496556 306 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 RPS27AP13-201ENST00000498403 237 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 RNA5SP464-201ENST00000516251 108 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 RN7SKP60-201ENST00000516985 239 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 TRMT10BP1-201ENST00000519377 943 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 AP005639.2-201ENST00000527592 928 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.84□□□□□ -1.63
TM9SF2Q99805 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.84□□□□□ -1.63
TM9SF2Q99805 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.84□□□□□ -1.63
TM9SF2Q99805 AP005403.1-201ENST00000579720 229 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 AC138761.3-201ENST00000579993 334 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 SNORD84-203ENST00000584275 78 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 MIR3672-201ENST00000584290 82 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 AC067852.3-201ENST00000589177 561 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 AC006116.10-201ENST00000591836 581 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF2Q99805 AC126915.2-201ENST00000610957 190 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.84□□□□□ -1.63
TM9SF2Q99805 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF2Q99805 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF2Q99805 AC018445.2-201ENST00000622987 260 ntBASIC4.84□□□□□ -1.63
TM9SF2Q99805 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.84□□□□□ -1.64
TM9SF2Q99805 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
TM9SF2Q99805 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
TM9SF2Q99805 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.84□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms