Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM11Q96F44 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM11Q96F44 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
TRIM11Q96F44 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.59□□□□□ -1.52
TRIM11Q96F44 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM11Q96F44 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM11Q96F44 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM11Q96F44 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM11Q96F44 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM11Q96F44 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM11Q96F44 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM11Q96F44 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM11Q96F44 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TRIM11Q96F44 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
TRIM11Q96F44 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM11Q96F44 Y_RNA.416-201ENST00000384014 113 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 RNU6-190P-201ENST00000384154 102 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 RNU6-1207P-201ENST00000384343 107 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 RNU6-125P-201ENST00000384505 107 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 RNU6-1081P-201ENST00000384537 107 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 U3.20-201ENST00000390909 217 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 PCNPP3-201ENST00000393579 471 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 RNU4-46P-201ENST00000410818 138 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 RNU6-55P-201ENST00000411092 107 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 RN7SKP293-201ENST00000411389 296 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM11Q96F44 RAC1P3-201ENST00000416129 580 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM11Q96F44 ELOCP20-201ENST00000422460 345 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 MRPS18CP6-201ENST00000423587 223 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM11Q96F44 MTCO3P29-201ENST00000432119 779 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 RPS26P40-201ENST00000435209 294 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 HIGD1AP11-201ENST00000438361 280 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 NEFMP1-201ENST00000443423 1006 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 CYCSP24-201ENST00000445119 316 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 AL161636.2-201ENST00000445179 927 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 AC022447.4-201ENST00000504053 364 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 RNA5SP384-201ENST00000516615 116 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 AC100784.1-201ENST00000522790 310 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 AC068446.3-201ENST00000555285 382 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM11Q96F44 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM11Q96F44 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM11Q96F44 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM11Q96F44 AC012433.1-201ENST00000588916 398 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 AL031320.1-201ENST00000604177 357 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 AC010424.2-201ENST00000607594 443 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 AC245517.5-201ENST00000611529 162 ntBASIC5.58□□□□□ -1.52
TRIM11Q96F44 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TRIM11Q96F44 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM11Q96F44 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM11Q96F44 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
TRIM11Q96F44 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM11Q96F44 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TRIM11Q96F44 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM11Q96F44 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
TRIM11Q96F44 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM11Q96F44 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM11Q96F44 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM11Q96F44 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM11Q96F44 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM11Q96F44 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM11Q96F44 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM11Q96F44 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM11Q96F44 RNU6-545P-201ENST00000362681 104 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 RNU1-74P-201ENST00000384108 171 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 SNORA41-201ENST00000384675 132 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 RNA5SP219-201ENST00000390940 113 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 MIR548H3-201ENST00000408771 118 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 Z99755.1-201ENST00000414048 380 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM11Q96F44 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM11Q96F44 SETP5-201ENST00000437270 562 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 RPL23AP15-201ENST00000450202 459 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 AC016724.1-201ENST00000453215 421 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 HMGB1P4-201ENST00000455362 567 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 AC108059.3-201ENST00000456388 214 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 SNORD5.1-201ENST00000458800 75 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 AL133445.1-201ENST00000467051 452 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 CEACAMP10-202ENST00000495431 496 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 RN7SL466P-201ENST00000497546 295 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 SNORA25.11-201ENST00000515935 105 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 RNU2-10P-201ENST00000516375 211 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 SNORA40.14-201ENST00000516543 86 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 RNU5B-3P-201ENST00000516601 115 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM11Q96F44 AC040926.1-201ENST00000530195 238 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.57□□□□□ -1.52
TRIM11Q96F44 AC020910.3-201ENST00000603701 874 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 AC008814.1-201ENST00000603797 406 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 HMGB1P50-201ENST00000605814 607 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.57□□□□□ -1.52
TRIM11Q96F44 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.57□□□□□ -1.52
TRIM11Q96F44 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM11Q96F44 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms