Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 Y_RNA.9-201ENST00000362354 101 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 U8.3-201ENST00000363321 132 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 RNU6-744P-201ENST00000365557 107 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 RNU6-1316P-201ENST00000384242 108 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 RNY3P14-201ENST00000384309 102 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 RPS20P2-201ENST00000402520 389 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 RNA5SP104-201ENST00000410989 118 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 SPA17P1-201ENST00000416656 452 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 NUP35P2-201ENST00000416748 943 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 AL139247.1-201ENST00000422768 325 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.01□□□□□ -1.61
RTF1Q92541 ELOCP18-201ENST00000434209 337 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 RPL22P17-201ENST00000438729 315 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.01□□□□□ -1.61
RTF1Q92541 VN1R34P-201ENST00000447387 883 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 WASF1P1-201ENST00000447560 1131 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 RPS17P13-201ENST00000448974 407 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 AL133162.1-201ENST00000463228 453 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 AC010683.1-201ENST00000473673 378 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.01□□□□□ -1.61
RTF1Q92541 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.01□□□□□ -1.61
RTF1Q92541 HMGB1P36-201ENST00000487709 576 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 AP001025.2-201ENST00000490908 477 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 AC012170.1-201ENST00000495139 359 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 HMGB1P29-201ENST00000505659 499 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.01□□□□□ -1.61
RTF1Q92541 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.01□□□□□ -1.61
RTF1Q92541 PTGES3P3-201ENST00000511479 482 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.01□□□□□ -1.61
RTF1Q92541 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.01□□□□□ -1.61
RTF1Q92541 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.01□□□□□ -1.61
RTF1Q92541 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.01□□□□□ -1.61
RTF1Q92541 AL157394.1-201ENST00000562983 1224 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 AC068135.2-201ENST00000569293 1028 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 MIR548S-201ENST00000581352 82 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 AC000123.2-201ENST00000623124 461 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.01□□□□□ -1.61
RTF1Q92541 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.01□□□□□ -1.61
RTF1Q92541 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RTF1Q92541 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTF1Q92541 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTF1Q92541 AL451142.2-201ENST00000429076 2090 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RTF1Q92541 ZNF962P-201ENST00000443465 3140 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
RTF1Q92541 AC018529.3-201ENST00000624212 2254 ntBASIC5□□□□□ -1.61
RTF1Q92541 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5□□□□□ -1.61
RTF1Q92541 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5□□□□□ -1.61
RTF1Q92541 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5□□□□□ -1.61
RTF1Q92541 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RTF1Q92541 AC092447.10-201ENST00000620607 1652 ntBASIC5□□□□□ -1.61
RTF1Q92541 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5□□□□□ -1.61
RTF1Q92541 AL161781.1-201ENST00000354277 403 ntBASIC5□□□□□ -1.61
RTF1Q92541 SNORD74.4-201ENST00000364129 80 ntBASIC5□□□□□ -1.61
RTF1Q92541 RNU4-12P-201ENST00000365233 139 ntBASIC5□□□□□ -1.61
RTF1Q92541 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5□□□□□ -1.61
RTF1Q92541 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5□□□□□ -1.61
RTF1Q92541 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5□□□□□ -1.61
RTF1Q92541 FCF1P10-201ENST00000407590 479 ntBASIC5□□□□□ -1.61
RTF1Q92541 TRAPPC2P10-201ENST00000415662 323 ntBASIC5□□□□□ -1.61
RTF1Q92541 AC245052.5-201ENST00000416320 649 ntBASIC5□□□□□ -1.61
RTF1Q92541 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5□□□□□ -1.61
RTF1Q92541 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5□□□□□ -1.61
RTF1Q92541 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5□□□□□ -1.61
RTF1Q92541 MTND4LP10-201ENST00000435146 291 ntBASIC5□□□□□ -1.61
RTF1Q92541 RPL12P46-201ENST00000436610 195 ntBASIC5□□□□□ -1.61
RTF1Q92541 RPL17P49-201ENST00000443728 411 ntBASIC5□□□□□ -1.61
RTF1Q92541 AC013267.1-201ENST00000458227 267 ntBASIC5□□□□□ -1.61
RTF1Q92541 CREM-226ENST00000469949 721 ntTSL 3 BASIC5□□□□□ -1.61
RTF1Q92541 FCF1P3-201ENST00000496394 590 ntBASIC5□□□□□ -1.61
RTF1Q92541 RNF138P1-201ENST00000502765 546 ntBASIC5□□□□□ -1.61
RTF1Q92541 AC006390.1-201ENST00000508068 283 ntBASIC5□□□□□ -1.61
RTF1Q92541 TXNP6-201ENST00000510190 310 ntBASIC5□□□□□ -1.61
RTF1Q92541 RNU2-46P-201ENST00000517038 113 ntBASIC5□□□□□ -1.61
RTF1Q92541 RNU6-201P-201ENST00000517100 61 ntBASIC5□□□□□ -1.61
RTF1Q92541 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5□□□□□ -1.61
RTF1Q92541 AC118273.2-201ENST00000532092 465 ntBASIC5□□□□□ -1.61
RTF1Q92541 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5□□□□□ -1.61
RTF1Q92541 AC034268.2-201ENST00000571784 482 ntBASIC5□□□□□ -1.61
RTF1Q92541 AC053481.3-201ENST00000577881 843 ntBASIC5□□□□□ -1.61
RTF1Q92541 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5□□□□□ -1.61
RTF1Q92541 HMGN1P30-201ENST00000589286 268 ntBASIC5□□□□□ -1.61
RTF1Q92541 BNIP3P33-201ENST00000598912 569 ntBASIC5□□□□□ -1.61
RTF1Q92541 CKS1BP3-201ENST00000600888 237 ntBASIC5□□□□□ -1.61
RTF1Q92541 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5□□□□□ -1.61
RTF1Q92541 AC004009.2-201ENST00000623016 728 ntBASIC5□□□□□ -1.61
RTF1Q92541 AC110994.2-201ENST00000635481 492 ntBASIC5□□□□□ -1.61
RTF1Q92541 MIR6863-201ENST00000636112 90 ntBASIC5□□□□□ -1.61
RTF1Q92541 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RTF1Q92541 ZNF285B-201ENST00000561698 1767 ntBASIC5□□□□□ -1.61
RTF1Q92541 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
RTF1Q92541 THUMPD3P1-201ENST00000506556 1480 ntBASIC5□□□□□ -1.61
RTF1Q92541 AC024560.2-201ENST00000507981 1497 ntBASIC5□□□□□ -1.61
RTF1Q92541 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5□□□□□ -1.61
RTF1Q92541 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RTF1Q92541 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RTF1Q92541 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RTF1Q92541 RNY4P34-201ENST00000364779 95 ntBASIC4.99□□□□□ -1.61
RTF1Q92541 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.99□□□□□ -1.61
RTF1Q92541 SNORD115-47-201ENST00000391226 86 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms