Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC019226.1-201ENST00000625666 515 ntBASIC3.73□□□□□ -1.81
CCDC89Q8N998 AC006927.4-201ENST00000639187 543 ntBASIC3.73□□□□□ -1.81
CCDC89Q8N998 OR5H6-203ENST00000642105 978 ntBASIC3.73□□□□□ -1.81
CCDC89Q8N998 RIOK3P1-201ENST00000418778 1528 ntBASIC3.73□□□□□ -1.81
CCDC89Q8N998 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC89Q8N998 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC89Q8N998 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC89Q8N998 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC89Q8N998 RNA5SP139-201ENST00000364340 117 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 SNORA23-201ENST00000365128 182 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 MTCO1P17-201ENST00000411522 491 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 RPL23AP69-201ENST00000431134 458 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 AL512844.2-201ENST00000433990 593 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 LSM1P1-201ENST00000438629 273 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 FGF7P5-201ENST00000441829 291 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 AC009220.1-201ENST00000451614 275 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 RPS20P20-201ENST00000460498 340 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 AC034222.1-201ENST00000494052 532 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 HIGD1AP5-201ENST00000529959 259 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 AL355836.1-201ENST00000555951 870 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 AMZ2P1-203ENST00000565833 850 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 HMGB1P6-201ENST00000569046 646 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 MIR5187-201ENST00000583479 76 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 AC245884.10-201ENST00000597355 337 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 AL161629.2-201ENST00000615347 275 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 AC009039.2-201ENST00000624524 529 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 MIR7153-201ENST00000637758 57 ntBASIC3.72□□□□□ -1.81
CCDC89Q8N998 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC89Q8N998 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CCDC89Q8N998 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
CCDC89Q8N998 AC058791.1-201ENST00000608412 3198 ntBASIC3.71□□□□□ -1.81
CCDC89Q8N998 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.71□□□□□ -1.81
CCDC89Q8N998 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CCDC89Q8N998 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CCDC89Q8N998 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC89Q8N998 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC89Q8N998 RNU6-223P-201ENST00000362830 107 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 RNU6-853P-201ENST00000364306 107 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 MIR141-201ENST00000384975 95 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 AL590084.2-201ENST00000401481 382 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 RNU6-757P-201ENST00000410334 100 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 AC068533.1-201ENST00000418542 415 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC89Q8N998 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC89Q8N998 AC091862.1-201ENST00000438016 1100 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 TPT1P12-201ENST00000448968 492 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 RSL24D1P3-201ENST00000449255 495 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 AC093392.2-201ENST00000450682 337 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC89Q8N998 AC020893.1-201ENST00000502452 580 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 AC093809.1-201ENST00000509155 340 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC89Q8N998 TTC39CP1-201ENST00000512513 755 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 RNU6-311P-201ENST00000516224 102 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC89Q8N998 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC89Q8N998 AC087465.1-201ENST00000560574 245 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CCDC89Q8N998 PCMTD1P7-201ENST00000634506 357 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC89Q8N998 AL138713.1-201ENST00000624026 2130 ntBASIC3.71□□□□□ -1.82
CCDC89Q8N998 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC89Q8N998 AC009902.3-201ENST00000606235 2172 ntBASIC3.7□□□□□ -1.82
CCDC89Q8N998 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC89Q8N998 AL049641.1-201ENST00000441055 1948 ntBASIC3.7□□□□□ -1.82
CCDC89Q8N998 AC007785.2-201ENST00000598627 1916 ntBASIC3.7□□□□□ -1.82
CCDC89Q8N998 MIR325-201ENST00000385260 98 ntBASIC3.7□□□□□ -1.82
CCDC89Q8N998 RPL32P23-201ENST00000397237 405 ntBASIC3.7□□□□□ -1.82
CCDC89Q8N998 RN7SKP266-201ENST00000410232 287 ntBASIC3.7□□□□□ -1.82
CCDC89Q8N998 RNU6-55P-201ENST00000411092 107 ntBASIC3.7□□□□□ -1.82
CCDC89Q8N998 RNU6-954P-201ENST00000411355 107 ntBASIC3.7□□□□□ -1.82
CCDC89Q8N998 SSR1P2-201ENST00000415208 787 ntBASIC3.7□□□□□ -1.82
CCDC89Q8N998 COX6CP17-201ENST00000421389 185 ntBASIC3.7□□□□□ -1.82
CCDC89Q8N998 AL390023.1-201ENST00000428836 262 ntBASIC3.7□□□□□ -1.82
CCDC89Q8N998 AC006539.3-201ENST00000454258 129 ntBASIC3.7□□□□□ -1.82
CCDC89Q8N998 snoU13.28-201ENST00000459235 104 ntBASIC3.7□□□□□ -1.82
CCDC89Q8N998 RN7SL132P-201ENST00000478131 296 ntBASIC3.7□□□□□ -1.82
CCDC89Q8N998 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC89Q8N998 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms