Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AC015813.6-201ENST00000624409 5808 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 RNU5A-1-201ENST00000362698 116 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 RNU6-179P-201ENST00000363350 107 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 RNU4-48P-201ENST00000365559 182 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AL359634.1-202ENST00000404721 284 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 RN7SKP177-201ENST00000410567 355 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 OR51A5P-201ENST00000415429 942 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 ZNF90P2-204ENST00000419323 1075 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 RPL34P6-201ENST00000432390 345 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AC016691.1-201ENST00000441321 413 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 FABP5P13-201ENST00000452144 328 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 RPL23AP31-201ENST00000456160 467 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 snoU13.24-201ENST00000458998 104 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AC108860.1-201ENST00000484521 383 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 RPL23AP55-201ENST00000498163 452 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AC025465.4-201ENST00000513422 638 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 MIR2116-201ENST00000517221 80 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AC100870.1-201ENST00000522035 505 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 NCAPGP2-201ENST00000557911 754 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AP001029.3-201ENST00000588063 596 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AC008752.3-201ENST00000588113 712 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AL670379.6-201ENST00000603753 252 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AL670379.11-201ENST00000604059 253 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AC008162.1-201ENST00000604718 254 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AL670379.1-201ENST00000604752 252 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AL670379.5-201ENST00000605253 252 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AL670379.12-201ENST00000605291 253 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AL670379.8-201ENST00000605353 252 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AL670379.7-201ENST00000605823 252 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AL020991.1-201ENST00000612314 373 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 EXOC5P1-201ENST00000510543 1969 ntBASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SYNPOQ8N3V7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 AC025031.4-201ENST00000621248 3271 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 AL157700.1-201ENST00000561973 1432 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 AP001350.1-201ENST00000601906 1524 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 XIAPP3-201ENST00000312918 795 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 RNA5SP515-201ENST00000364570 118 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 RNA5SP167-201ENST00000365461 116 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 UBBP2-201ENST00000376781 231 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 AL590762.2-201ENST00000395798 571 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 NDUFS5P1-201ENST00000405668 289 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 AC114491.1-201ENST00000416095 246 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 RPL36AP10-201ENST00000421785 322 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 RPL21P66-201ENST00000426566 466 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 DDX3P2-201ENST00000446138 111 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 CYCSP34-201ENST00000458172 304 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 RNU6-261P-201ENST00000459506 102 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 RPL7AP28-201ENST00000464513 571 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 RPL5P30-201ENST00000465511 891 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 AL049874.1-201ENST00000489560 388 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 RNA5SP249-201ENST00000516127 99 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 NRON-201ENST00000517270 370 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 AC103843.2-201ENST00000530523 682 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 MIR1254-2-201ENST00000579553 63 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 MIR3138-201ENST00000585238 82 ntBASIC4.73□□□□□ -1.65
SYNPOQ8N3V7 AC091979.2-201ENST00000607514 214 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms