Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PMS1P54277 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.08□□□□□ -1.6
PMS1P54277 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PMS1P54277 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.08□□□□□ -1.6
PMS1P54277 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.08□□□□□ -1.6
PMS1P54277 MTCO1P9-201ENST00000505577 1534 ntBASIC5.07□□□□□ -1.6
PMS1P54277 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.07□□□□□ -1.6
PMS1P54277 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.07□□□□□ -1.6
PMS1P54277 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.07□□□□□ -1.6
PMS1P54277 EOGT-210ENST00000615922 1931 ntBASIC5.07□□□□□ -1.6
PMS1P54277 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.07□□□□□ -1.6
PMS1P54277 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PMS1P54277 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PMS1P54277 AC073343.1-201ENST00000328239 651 ntBASIC5.07□□□□□ -1.6
PMS1P54277 RNU6-179P-201ENST00000363350 107 ntBASIC5.07□□□□□ -1.6
PMS1P54277 Y_RNA.326-201ENST00000365176 113 ntBASIC5.07□□□□□ -1.6
PMS1P54277 RNU6-38P-201ENST00000384085 107 ntBASIC5.07□□□□□ -1.6
PMS1P54277 RNU6-831P-201ENST00000384548 107 ntBASIC5.07□□□□□ -1.6
PMS1P54277 RNU11-4P-201ENST00000391149 133 ntBASIC5.07□□□□□ -1.6
PMS1P54277 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.07□□□□□ -1.6
PMS1P54277 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.07□□□□□ -1.6
PMS1P54277 HSPE1P1-201ENST00000421494 318 ntBASIC5.07□□□□□ -1.6
PMS1P54277 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.07□□□□□ -1.6
PMS1P54277 AL359265.2-201ENST00000434367 631 ntBASIC5.07□□□□□ -1.6
PMS1P54277 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.07□□□□□ -1.6
PMS1P54277 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.07□□□□□ -1.6
PMS1P54277 ISCUP1-201ENST00000454451 448 ntBASIC5.07□□□□□ -1.6
PMS1P54277 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PMS1P54277 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.07□□□□□ -1.6
PMS1P54277 RPL36AP13-201ENST00000457490 317 ntBASIC5.07□□□□□ -1.6
PMS1P54277 RNU6-333P-201ENST00000459117 107 ntBASIC5.07□□□□□ -1.6
PMS1P54277 Y_RNA.632-201ENST00000459189 102 ntBASIC5.07□□□□□ -1.6
PMS1P54277 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.07□□□□□ -1.6
PMS1P54277 RN7SL817P-201ENST00000480777 288 ntBASIC5.07□□□□□ -1.6
PMS1P54277 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.07□□□□□ -1.6
PMS1P54277 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.07□□□□□ -1.6
PMS1P54277 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.07□□□□□ -1.6
PMS1P54277 SNORD116-26-201ENST00000516006 96 ntBASIC5.07□□□□□ -1.6
PMS1P54277 RNU6-64P-201ENST00000517119 105 ntBASIC5.07□□□□□ -1.6
PMS1P54277 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.07□□□□□ -1.6
PMS1P54277 HMGN1P28-201ENST00000521340 364 ntBASIC5.07□□□□□ -1.6
PMS1P54277 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.07□□□□□ -1.6
PMS1P54277 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PMS1P54277 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.07□□□□□ -1.6
PMS1P54277 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.07□□□□□ -1.6
PMS1P54277 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.07□□□□□ -1.6
PMS1P54277 MIR3667-201ENST00000581025 74 ntBASIC5.07□□□□□ -1.6
PMS1P54277 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.07□□□□□ -1.6
PMS1P54277 uc_338.18-201ENST00000615451 175 ntBASIC5.07□□□□□ -1.6
PMS1P54277 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.07□□□□□ -1.6
PMS1P54277 AL161637.1-201ENST00000622380 412 ntBASIC5.07□□□□□ -1.6
PMS1P54277 AC019278.1-201ENST00000623516 479 ntBASIC5.07□□□□□ -1.6
PMS1P54277 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.07□□□□□ -1.6
PMS1P54277 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.07□□□□□ -1.6
PMS1P54277 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PMS1P54277 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.07□□□□□ -1.6
PMS1P54277 AC009951.1-201ENST00000623674 2614 ntBASIC5.07□□□□□ -1.6
PMS1P54277 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
PMS1P54277 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PMS1P54277 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PMS1P54277 MTND4P14-201ENST00000435799 1354 ntBASIC5.06□□□□□ -1.6
PMS1P54277 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PMS1P54277 TAB3P1-202ENST00000452645 1634 ntBASIC5.06□□□□□ -1.6
PMS1P54277 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.06□□□□□ -1.6
PMS1P54277 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PMS1P54277 AL590240.1-201ENST00000334118 313 ntBASIC5.06□□□□□ -1.6
PMS1P54277 RNU1-20P-201ENST00000363314 162 ntBASIC5.06□□□□□ -1.6
PMS1P54277 Y_RNA.474-201ENST00000384341 102 ntBASIC5.06□□□□□ -1.6
PMS1P54277 AL583835.1-201ENST00000399570 407 ntBASIC5.06□□□□□ -1.6
PMS1P54277 RNU2-36P-201ENST00000410361 191 ntBASIC5.06□□□□□ -1.6
PMS1P54277 RNU2-47P-201ENST00000410649 186 ntBASIC5.06□□□□□ -1.6
PMS1P54277 RNA5SP107-201ENST00000411358 122 ntBASIC5.06□□□□□ -1.6
PMS1P54277 AC068533.1-201ENST00000418542 415 ntBASIC5.06□□□□□ -1.6
PMS1P54277 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.06□□□□□ -1.6
PMS1P54277 RPL23AP38-201ENST00000423801 469 ntBASIC5.06□□□□□ -1.6
PMS1P54277 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.06□□□□□ -1.6
PMS1P54277 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.06□□□□□ -1.6
PMS1P54277 HMGB3P21-201ENST00000452483 547 ntBASIC5.06□□□□□ -1.6
PMS1P54277 SCARNA10-201ENST00000459255 330 ntBASIC5.06□□□□□ -1.6
PMS1P54277 RPS3AP41-201ENST00000462701 778 ntBASIC5.06□□□□□ -1.6
PMS1P54277 RPL23AP11-201ENST00000475260 469 ntBASIC5.06□□□□□ -1.6
PMS1P54277 AC093270.2-201ENST00000486157 792 ntBASIC5.06□□□□□ -1.6
PMS1P54277 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.06□□□□□ -1.6
PMS1P54277 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.06□□□□□ -1.6
PMS1P54277 AC007016.1-201ENST00000512110 244 ntBASIC5.06□□□□□ -1.6
PMS1P54277 Y_RNA.665-201ENST00000516177 98 ntBASIC5.06□□□□□ -1.6
PMS1P54277 RN7SKP116-201ENST00000516902 319 ntBASIC5.06□□□□□ -1.6
PMS1P54277 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.06□□□□□ -1.6
PMS1P54277 RPL7P20-201ENST00000520308 745 ntBASIC5.06□□□□□ -1.6
PMS1P54277 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.06□□□□□ -1.6
PMS1P54277 PTP4A1P6-201ENST00000531034 478 ntBASIC5.06□□□□□ -1.6
PMS1P54277 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PMS1P54277 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.06□□□□□ -1.6
PMS1P54277 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.06□□□□□ -1.6
PMS1P54277 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.06□□□□□ -1.6
PMS1P54277 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PMS1P54277 AC044860.2-201ENST00000561005 179 ntBASIC5.06□□□□□ -1.6
PMS1P54277 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.06□□□□□ -1.6
PMS1P54277 MIR4646-201ENST00000580775 63 ntBASIC5.06□□□□□ -1.6
PMS1P54277 MIR4737-201ENST00000583979 81 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms