Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL606834.3-201ENST00000602615 496 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXA9P31269 RPAP2P1-201ENST00000603626 1168 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 AC009220.3-201ENST00000604318 586 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 AP004247.3-201ENST00000608682 624 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 AC131902.3-201ENST00000611767 581 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HOXA9P31269 AC231759.1-201ENST00000616455 597 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 AC002076.2-201ENST00000617362 122 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 VN1R7P-201ENST00000619242 903 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HOXA9P31269 MTND5P28-201ENST00000438005 1594 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 AL049780.3-201ENST00000624612 1583 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 MTND4P9-201ENST00000507819 1346 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HOXA9P31269 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
HOXA9P31269 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
HOXA9P31269 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HOXA9P31269 RNU6-1243P-201ENST00000364028 107 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXA9P31269 RNU6-549P-201ENST00000384433 107 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 RNU6-1151P-201ENST00000384684 107 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 MIR620-201ENST00000385232 95 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 AL031679.1-201ENST00000400616 525 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 MIR887-201ENST00000401258 79 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 SFR1P1-201ENST00000403720 688 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 RNU2-52P-201ENST00000410680 190 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXA9P31269 SDCBPP3-201ENST00000419629 891 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 SFR1P2-201ENST00000421841 730 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 PTP4A1P7-201ENST00000423476 514 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 RPS6P14-201ENST00000425165 719 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 DUTP6-201ENST00000425573 462 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 SAR1AP4-201ENST00000429225 591 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 AC244505.4-201ENST00000434905 287 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 AC234064.1-201ENST00000436312 247 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 SSXP5-201ENST00000443473 287 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 AP000936.2-201ENST00000447151 681 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXA9P31269 AC244505.3-201ENST00000454598 187 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.93□□□□□ -1.94
HOXA9P31269 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.93□□□□□ -1.94
HOXA9P31269 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HOXA9P31269 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.93□□□□□ -1.94
HOXA9P31269 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXA9P31269 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXA9P31269 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXA9P31269 HIGD1AP6-201ENST00000521833 279 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 HMGB1P1-201ENST00000522557 636 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 AC022690.1-201ENST00000526681 550 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXA9P31269 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXA9P31269 DNAJC8P1-201ENST00000554535 372 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXA9P31269 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXA9P31269 VN1R87P-201ENST00000596706 487 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 AL158050.2-201ENST00000605336 568 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 AC107294.1-201ENST00000609524 467 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 AL391834.2-201ENST00000609982 546 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXA9P31269 AC010149.2-201ENST00000637608 315 ntBASIC2.93□□□□□ -1.94
HOXA9P31269 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
HOXA9P31269 AC111188.2-201ENST00000529697 1387 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 SNORA14A-201ENST00000364773 135 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 RNU6-619P-201ENST00000365146 108 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HOXA9P31269 CD24P4-201ENST00000382840 243 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 RNU6-1027P-201ENST00000383998 107 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 MIR122-201ENST00000385044 85 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 OR51A3P-201ENST00000413596 924 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 USP9YP21-201ENST00000420603 432 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 AL354692.1-201ENST00000423044 315 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXA9P31269 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXA9P31269 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXA9P31269 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.92□□□□□ -1.94
HOXA9P31269 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXA9P31269 RPL7P36-201ENST00000444633 681 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 AL590639.1-201ENST00000456484 337 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXA9P31269 HMGB1P25-201ENST00000468402 607 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 AC126389.1-201ENST00000477436 290 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.92□□□□□ -1.94
HOXA9P31269 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
HOXA9P31269 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXA9P31269 RNU6-202P-201ENST00000515998 96 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 SNORA19.3-201ENST00000516165 130 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 RNU6-56P-201ENST00000516986 93 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 AC118942.1-201ENST00000529674 1035 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.92□□□□□ -1.94
HOXA9P31269 AC087897.1-201ENST00000550134 156 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 YWHAZP1-201ENST00000556286 722 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 AL157394.1-201ENST00000562983 1224 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 EIF5A2P1-201ENST00000564027 460 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.92□□□□□ -1.94
HOXA9P31269 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXA9P31269 DUXAP4-201ENST00000603046 613 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 AC026790.2-201ENST00000606282 430 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 AL139022.2-201ENST00000606934 443 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms