Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 SNORA31.1-201ENST00000515993 133 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 SNORA31.5-201ENST00000516190 133 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 OR5BN1P-201ENST00000532955 829 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.83□□□□□ -1.96
CTDNEP1O95476 AL442163.2-201ENST00000553912 710 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.83□□□□□ -1.96
CTDNEP1O95476 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.83□□□□□ -1.96
CTDNEP1O95476 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.83□□□□□ -1.96
CTDNEP1O95476 AC126365.2-201ENST00000580630 379 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 AC060766.3-201ENST00000591442 263 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 TPMTP1-201ENST00000592307 737 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 AC124016.2-201ENST00000610058 665 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 AL359198.2-201ENST00000611836 194 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CTDNEP1O95476 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.83□□□□□ -1.96
CTDNEP1O95476 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.83□□□□□ -1.96
CTDNEP1O95476 BX649567.1-201ENST00000642071 1134 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.83□□□□□ -1.96
CTDNEP1O95476 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CTDNEP1O95476 AC016717.2-201ENST00000609089 5141 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CTDNEP1O95476 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CTDNEP1O95476 MIR887-201ENST00000401258 79 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 AL359511.1-201ENST00000402970 211 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 AL031121.1-201ENST00000406553 254 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 FAT1P1-201ENST00000406588 507 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.82□□□□□ -1.96
CTDNEP1O95476 AC109780.2-201ENST00000413467 845 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.82□□□□□ -1.96
CTDNEP1O95476 AC013410.2-201ENST00000422627 201 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 AL009174.1-201ENST00000426577 416 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 SETP8-201ENST00000435341 628 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 ARF4P4-201ENST00000439608 520 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 AC004865.1-201ENST00000442276 1003 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 RNF2P1-201ENST00000442955 1010 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 SEPT14P24-201ENST00000447236 180 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 MTATP6P14-201ENST00000455189 673 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 RN7SL432P-201ENST00000484057 298 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 HMGB1P22-201ENST00000505315 124 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 AC008885.2-201ENST00000509506 930 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 AC109329.2-201ENST00000519658 482 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.82□□□□□ -1.96
CTDNEP1O95476 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.82□□□□□ -1.96
CTDNEP1O95476 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.82□□□□□ -1.96
CTDNEP1O95476 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.82□□□□□ -1.96
CTDNEP1O95476 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.82□□□□□ -1.96
CTDNEP1O95476 CYB5AP5-201ENST00000549779 389 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.82□□□□□ -1.96
CTDNEP1O95476 AC004217.3-201ENST00000551552 878 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.82□□□□□ -1.96
CTDNEP1O95476 MTCYBP28-201ENST00000566728 1132 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.82□□□□□ -1.96
CTDNEP1O95476 AC008687.2-201ENST00000597865 520 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 AF129408.1-201ENST00000608767 431 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 AL590396.4-201ENST00000636779 956 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 MTCO1P6-201ENST00000481192 1384 ntBASIC2.82□□□□□ -1.96
CTDNEP1O95476 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CTDNEP1O95476 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.82□□□□□ -1.96
CTDNEP1O95476 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
CTDNEP1O95476 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CTDNEP1O95476 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.81□□□□□ -1.96
CTDNEP1O95476 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.81□□□□□ -1.96
CTDNEP1O95476 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CTDNEP1O95476 SNORA5B-201ENST00000363786 132 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 U8.9-201ENST00000365667 134 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 RNU6-629P-201ENST00000384061 103 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 MIR196B-201ENST00000384852 84 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 RNU6-1000P-201ENST00000391066 106 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 SNORA26.7-201ENST00000391288 122 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.81□□□□□ -1.96
CTDNEP1O95476 RPS3AP26-201ENST00000398259 784 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 NDUFB4P4-201ENST00000404822 243 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.81□□□□□ -1.96
CTDNEP1O95476 RNA5SP181-201ENST00000410246 98 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 AC096533.1-201ENST00000411645 353 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 OR4K6P-201ENST00000416478 897 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 AC027644.1-201ENST00000419595 298 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.81□□□□□ -1.96
CTDNEP1O95476 MTCO1P39-201ENST00000426148 480 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.81□□□□□ -1.96
CTDNEP1O95476 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.81□□□□□ -1.96
CTDNEP1O95476 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.81□□□□□ -1.96
CTDNEP1O95476 YWHAZP8-201ENST00000436935 731 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 NPM1P13-201ENST00000452663 865 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 RPS24P6-201ENST00000452670 400 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.81□□□□□ -1.96
CTDNEP1O95476 BX248409.1-201ENST00000455497 255 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 snoU13.24-201ENST00000458998 104 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 AC008571.1-201ENST00000467232 300 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 RPL23AP45-201ENST00000476406 468 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.81□□□□□ -1.96
CTDNEP1O95476 DSTNP2-201ENST00000504533 515 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.81□□□□□ -1.96
CTDNEP1O95476 AP003467.2-201ENST00000520175 319 ntBASIC2.81□□□□□ -1.96
CTDNEP1O95476 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.81□□□□□ -1.96
CTDNEP1O95476 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.81□□□□□ -1.96
CTDNEP1O95476 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.81□□□□□ -1.96
CTDNEP1O95476 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.81□□□□□ -1.96
CTDNEP1O95476 ZNF971P-201ENST00000562068 1249 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms