Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC009831.5-201ENST00000624000 3189 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
GFRA3O60609 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA3O60609 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA3O60609 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA3O60609 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.78□□□□□ -1.48
GFRA3O60609 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA3O60609 AC007998.4-201ENST00000612496 2533 ntBASIC5.78□□□□□ -1.48
GFRA3O60609 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA3O60609 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
GFRA3O60609 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
GFRA3O60609 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA3O60609 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC5.78□□□□□ -1.48
GFRA3O60609 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
GFRA3O60609 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA3O60609 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC5.77□□□□□ -1.49
GFRA3O60609 AL078621.3-201ENST00000623707 2042 ntBASIC5.77□□□□□ -1.49
GFRA3O60609 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA3O60609 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA3O60609 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
GFRA3O60609 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA3O60609 AC007114.2-201ENST00000576014 4281 ntBASIC5.77□□□□□ -1.49
GFRA3O60609 RNU6-968P-201ENST00000384076 107 ntBASIC5.77□□□□□ -1.49
GFRA3O60609 RNU6-376P-201ENST00000384731 106 ntBASIC5.77□□□□□ -1.49
GFRA3O60609 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.77□□□□□ -1.49
GFRA3O60609 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.77□□□□□ -1.49
GFRA3O60609 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.77□□□□□ -1.49
GFRA3O60609 RPS27AP1-201ENST00000475545 471 ntBASIC5.77□□□□□ -1.49
GFRA3O60609 SNRPCP2-201ENST00000504370 475 ntBASIC5.77□□□□□ -1.49
GFRA3O60609 ANXA2P1-201ENST00000505539 926 ntBASIC5.77□□□□□ -1.49
GFRA3O60609 RNU2-56P-201ENST00000516826 190 ntBASIC5.77□□□□□ -1.49
GFRA3O60609 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC5.77□□□□□ -1.49
GFRA3O60609 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.77□□□□□ -1.49
GFRA3O60609 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.77□□□□□ -1.49
GFRA3O60609 PARP1P2-201ENST00000556806 195 ntBASIC5.77□□□□□ -1.49
GFRA3O60609 AC104581.2-201ENST00000572227 430 ntBASIC5.77□□□□□ -1.49
GFRA3O60609 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.77□□□□□ -1.49
GFRA3O60609 AC087783.2-201ENST00000605070 562 ntBASIC5.77□□□□□ -1.49
GFRA3O60609 U7.2-201ENST00000607576 63 ntBASIC5.77□□□□□ -1.49
GFRA3O60609 MIR6758-201ENST00000620653 63 ntBASIC5.77□□□□□ -1.49
GFRA3O60609 CDRT1-208ENST00000630868 794 ntBASIC5.77□□□□□ -1.49
GFRA3O60609 U6.95-201ENST00000636931 70 ntBASIC5.77□□□□□ -1.49
GFRA3O60609 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC5.77□□□□□ -1.49
GFRA3O60609 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA3O60609 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA3O60609 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA3O60609 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.77□□□□□ -1.49
GFRA3O60609 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA3O60609 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.77□□□□□ -1.49
GFRA3O60609 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.77□□□□□ -1.49
GFRA3O60609 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA3O60609 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.77□□□□□ -1.49
GFRA3O60609 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
GFRA3O60609 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA3O60609 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
GFRA3O60609 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC5.77□□□□□ -1.49
GFRA3O60609 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA3O60609 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA3O60609 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA3O60609 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GFRA3O60609 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
GFRA3O60609 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
GFRA3O60609 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC5.76□□□□□ -1.49
GFRA3O60609 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.76□□□□□ -1.49
GFRA3O60609 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA3O60609 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC5.76□□□□□ -1.49
GFRA3O60609 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA3O60609 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA3O60609 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA3O60609 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
GFRA3O60609 Y_RNA.35-201ENST00000362601 101 ntBASIC5.76□□□□□ -1.49
GFRA3O60609 RNU6-371P-201ENST00000364283 108 ntBASIC5.76□□□□□ -1.49
GFRA3O60609 SNORA70.2-201ENST00000364506 135 ntBASIC5.76□□□□□ -1.49
GFRA3O60609 AL591034.1-201ENST00000407447 340 ntBASIC5.76□□□□□ -1.49
GFRA3O60609 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.76□□□□□ -1.49
GFRA3O60609 PLGLA-201ENST00000465668 449 ntBASIC5.76□□□□□ -1.49
GFRA3O60609 AC010683.1-201ENST00000473673 378 ntBASIC5.76□□□□□ -1.49
GFRA3O60609 ATP5LP5-201ENST00000483050 299 ntBASIC5.76□□□□□ -1.49
GFRA3O60609 RPL21P13-201ENST00000488305 481 ntBASIC5.76□□□□□ -1.49
GFRA3O60609 AC107027.2-201ENST00000512197 115 ntBASIC5.76□□□□□ -1.49
GFRA3O60609 Y_RNA.689-201ENST00000516589 107 ntBASIC5.76□□□□□ -1.49
GFRA3O60609 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.76□□□□□ -1.49
GFRA3O60609 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.76□□□□□ -1.49
GFRA3O60609 BPIFA4P-203ENST00000603168 689 ntBASIC5.76□□□□□ -1.49
GFRA3O60609 AL139099.4-201ENST00000614802 114 ntBASIC5.76□□□□□ -1.49
GFRA3O60609 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.76□□□□□ -1.49
GFRA3O60609 IQCB2P-201ENST00000401788 1633 ntBASIC5.76□□□□□ -1.49
GFRA3O60609 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
GFRA3O60609 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
GFRA3O60609 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.76□□□□□ -1.49
GFRA3O60609 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
GFRA3O60609 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA3O60609 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
GFRA3O60609 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.76□□□□□ -1.49
GFRA3O60609 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA3O60609 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA3O60609 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA3O60609 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.76□□□□□ -1.49
GFRA3O60609 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GFRA3O60609 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms