Protein–RNA interactions for Protein: O43248

HOXC11, Homeobox protein Hox-C11, humanhuman

Predicted RBP Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11O43248 MIR3974-201ENST00000637126 96 ntBASIC3.96□□□□□ -1.78
HOXC11O43248 U6.98-201ENST00000637157 84 ntBASIC3.96□□□□□ -1.78
HOXC11O43248 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC11O43248 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC11O43248 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC11O43248 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC11O43248 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC11O43248 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
HOXC11O43248 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC11O43248 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.95□□□□□ -1.78
HOXC11O43248 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
HOXC11O43248 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC11O43248 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC11O43248 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC11O43248 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC11O43248 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC11O43248 RPL21P17-201ENST00000397467 475 ntBASIC3.95□□□□□ -1.78
HOXC11O43248 RNU4-65P-201ENST00000410473 140 ntBASIC3.95□□□□□ -1.78
HOXC11O43248 RPL7P8-201ENST00000411964 730 ntBASIC3.95□□□□□ -1.78
HOXC11O43248 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC11O43248 AC069157.1-201ENST00000421749 137 ntBASIC3.95□□□□□ -1.78
HOXC11O43248 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC11O43248 AC109583.1-201ENST00000432156 268 ntBASIC3.95□□□□□ -1.78
HOXC11O43248 AC096638.2-201ENST00000434965 711 ntBASIC3.95□□□□□ -1.78
HOXC11O43248 RPL35AP22-201ENST00000436855 335 ntBASIC3.95□□□□□ -1.78
HOXC11O43248 BMI1P1-201ENST00000445879 941 ntBASIC3.95□□□□□ -1.78
HOXC11O43248 KATNBL1P6-201ENST00000453433 915 ntBASIC3.95□□□□□ -1.78
HOXC11O43248 MTND3P7-201ENST00000474435 343 ntBASIC3.95□□□□□ -1.78
HOXC11O43248 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXC11O43248 AL391156.1-201ENST00000554965 554 ntBASIC3.95□□□□□ -1.78
HOXC11O43248 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC11O43248 MIR5187-201ENST00000583479 76 ntBASIC3.95□□□□□ -1.78
HOXC11O43248 AL034351.1-201ENST00000605288 668 ntBASIC3.95□□□□□ -1.78
HOXC11O43248 AC092354.1-201ENST00000606057 376 ntBASIC3.95□□□□□ -1.78
HOXC11O43248 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
HOXC11O43248 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC11O43248 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC11O43248 MIR4275-201ENST00000636486 87 ntBASIC3.95□□□□□ -1.78
HOXC11O43248 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC11O43248 AC009812.4-201ENST00000569134 1805 ntBASIC3.95□□□□□ -1.78
HOXC11O43248 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC11O43248 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC11O43248 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC11O43248 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC11O43248 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC11O43248 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC11O43248 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
HOXC11O43248 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC11O43248 AC092326.2-201ENST00000624772 1561 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC11O43248 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HOXC11O43248 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HOXC11O43248 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
HOXC11O43248 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC11O43248 RNU6-432P-201ENST00000384196 109 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 SKINT1L-201ENST00000401057 817 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 AP000567.1-201ENST00000406413 156 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 MTHFD2P2-201ENST00000407725 247 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC11O43248 AC007390.1-201ENST00000415722 356 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC11O43248 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC11O43248 AC233728.2-201ENST00000425348 757 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 LARP1BP3-201ENST00000437229 869 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXC11O43248 AL592447.1-201ENST00000447592 540 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC11O43248 MTCO1P42-201ENST00000457379 726 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 AC025554.1-201ENST00000505641 188 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 RNU6-798P-201ENST00000516912 103 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 AC007991.1-201ENST00000522680 631 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 AC087373.1-201ENST00000524920 491 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 AP001804.3-201ENST00000525146 880 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC11O43248 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC11O43248 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXC11O43248 AL121766.1-201ENST00000547436 487 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC11O43248 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXC11O43248 AC091489.2-201ENST00000566263 604 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 ROCK1P1-201ENST00000573767 549 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 AC011260.1-201ENST00000578420 472 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC11O43248 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.94□□□□□ -1.78
HOXC11O43248 AC244505.7-201ENST00000599675 272 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 AC012360.2-201ENST00000609349 391 ntBASIC3.94□□□□□ -1.78
HOXC11O43248 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.94□□□□□ -1.78
HOXC11O43248 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC11O43248 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC11O43248 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.94□□□□□ -1.78
HOXC11O43248 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC11O43248 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
HOXC11O43248 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXC11O43248 DDX10P1-201ENST00000448545 1933 ntBASIC3.93□□□□□ -1.78
HOXC11O43248 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXC11O43248 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.93□□□□□ -1.78
HOXC11O43248 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
HOXC11O43248 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXC11O43248 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXC11O43248 DEFB108F-201ENST00000344638 222 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms