Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 RPS3AP14-201ENST00000483907 780 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 AC010486.1-201ENST00000511793 424 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 AC026412.2-201ENST00000512270 1075 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 RNU6-1281P-201ENST00000516223 105 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 AC037471.2-201ENST00000564941 598 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 AL355598.1-201ENST00000604169 202 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 AL160290.3-201ENST00000604869 165 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 AC234782.5-201ENST00000617723 324 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 AC005086.4-201ENST00000623065 213 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 AC021242.1-201ENST00000507315 2035 ntBASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.09□□□□□ -1.92
NOTCH3Q9UM47 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 Y_RNA.86-201ENST00000363020 111 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 RNU6-1309P-201ENST00000363305 108 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 Y_RNA.157-201ENST00000363638 102 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 RNU6-1322P-201ENST00000364309 107 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 RNU5E-5P-201ENST00000365379 116 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 SNORA63.7-201ENST00000365579 123 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 SNORA22B-201ENST00000383876 138 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 Y_RNA.422-201ENST00000384054 114 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 SNORD116-29-201ENST00000384516 83 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 RAB9AP5-201ENST00000437794 597 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 RAB9AP2-201ENST00000443911 597 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 RPS20P20-201ENST00000460498 340 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 RPS15AP36-201ENST00000492022 382 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 RNU6-430P-201ENST00000517078 107 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC090136.1-201ENST00000520009 240 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 ZNF705CP-201ENST00000530515 889 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 MIR3149-201ENST00000584629 83 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC233280.2-201ENST00000603917 1070 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC104662.1-201ENST00000604448 511 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 MIR8069-1-201ENST00000616627 86 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 MIR8069-2-201ENST00000621412 86 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 HMGB1P5-201ENST00000255320 642 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 OR5J1P-201ENST00000313544 939 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 Y_RNA.72-201ENST00000362894 103 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 RNU6-195P-201ENST00000411352 109 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC096664.2-201ENST00000411843 406 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 PIGFP2-201ENST00000421400 651 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 SKP1P3-201ENST00000429280 487 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC002486.1-201ENST00000435098 391 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AL731563.1-201ENST00000442202 214 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC107398.1-201ENST00000486904 505 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC018630.1-201ENST00000541376 925 ntBASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.08□□□□□ -1.92
NOTCH3Q9UM47 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms