Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC079781.2-201ENST00000446424 169 ntBASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 AL358232.1-201ENST00000448030 501 ntBASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 MRPS17P3-201ENST00000465453 385 ntBASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 RPS20P21-201ENST00000466859 343 ntBASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 RN7SKP13-201ENST00000515933 244 ntBASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 RNU4-49P-201ENST00000516080 140 ntBASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 RNU6-1314P-201ENST00000517139 104 ntBASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 AC020661.2-201ENST00000560114 134 ntBASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 AC124068.1-201ENST00000563131 678 ntBASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 AL121655.1-201ENST00000605811 308 ntBASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 AC079597.1-201ENST00000624306 508 ntBASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 MTND4P27-201ENST00000450813 1354 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 MIR372-201ENST00000362225 67 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 Y_RNA.384-201ENST00000383909 102 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 MIR554-201ENST00000384874 96 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 RPL7P60-201ENST00000397636 735 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 RN7SKP202-201ENST00000410439 330 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 NDUFB4P5-201ENST00000415445 361 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 RPS7P15-201ENST00000415804 584 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 AC092832.1-201ENST00000422934 400 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 AC008065.1-201ENST00000428525 348 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 HMGB1P18-201ENST00000438801 619 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 BRK1P2-201ENST00000442875 223 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 HMGB1P15-201ENST00000453854 435 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 AL163973.1-201ENST00000484753 577 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 PARP4P3-201ENST00000510265 317 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 RNU6-410P-201ENST00000517006 107 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 AP003497.1-201ENST00000528472 562 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 MIR4504-201ENST00000577413 92 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 MIR3146-201ENST00000580367 79 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 MIR3671-201ENST00000580455 88 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 AL133215.3-201ENST00000609801 448 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 AC104237.2-201ENST00000612456 443 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 CPHL1P-201ENST00000461341 3407 ntBASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM7Q9NR12 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 MIR383-201ENST00000362257 73 ntBASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 MIR208A-201ENST00000362287 71 ntBASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 SNORA62.3-201ENST00000365110 153 ntBASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 RNU6-996P-201ENST00000365438 107 ntBASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 RNU6-1293P-201ENST00000384077 107 ntBASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 MIR606-201ENST00000384851 96 ntBASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 SNORA75.4-201ENST00000391278 119 ntBASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 AL024474.1-201ENST00000404655 591 ntBASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 SNORA11F-201ENST00000408237 128 ntBASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 RPL31P45-201ENST00000419532 356 ntBASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 DUTP6-201ENST00000425573 462 ntBASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 AC236972.2-201ENST00000434979 310 ntBASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 AL138799.3-201ENST00000438968 350 ntBASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 RPL23AP43-201ENST00000446445 471 ntBASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 AC006480.1-201ENST00000449887 378 ntBASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 AL356010.1-201ENST00000456364 102 ntBASIC5.04□□□□□ -1.6
PDLIM7Q9NR12 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms