Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM55Q9BYV6 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM55Q9BYV6 AC079075.1-201ENST00000559543 878 ntBASIC4.95□□□□□ -1.62
TRIM55Q9BYV6 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM55Q9BYV6 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM55Q9BYV6 AC010525.2-201ENST00000590920 195 ntBASIC4.95□□□□□ -1.62
TRIM55Q9BYV6 AC068831.8-201ENST00000620171 435 ntBASIC4.95□□□□□ -1.62
TRIM55Q9BYV6 AL589994.2-201ENST00000621124 579 ntBASIC4.95□□□□□ -1.62
TRIM55Q9BYV6 AC025034.2-201ENST00000623264 286 ntBASIC4.95□□□□□ -1.62
TRIM55Q9BYV6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM55Q9BYV6 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TRIM55Q9BYV6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM55Q9BYV6 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM55Q9BYV6 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM55Q9BYV6 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 SNORA73.1-201ENST00000363107 205 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 RNU6-61P-201ENST00000365528 109 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 NDUFS5P1-201ENST00000405668 289 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AL360081.1-201ENST00000428299 555 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AL359265.2-201ENST00000434367 631 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AC098614.3-201ENST00000438957 440 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AL450023.3-201ENST00000440592 271 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 USP9YP8-201ENST00000441913 500 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AL691482.1-201ENST00000453255 87 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AC114786.4-201ENST00000508771 728 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 Vault.1-201ENST00000516474 102 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 RNU6-840P-201ENST00000517275 65 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 SUMO2P20-201ENST00000520803 283 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 MIR4703-201ENST00000577728 79 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 FAM60BP-201ENST00000578364 658 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AC011447.4-201ENST00000587562 111 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AC009994.1-201ENST00000606889 253 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AP005432.2-201ENST00000608162 586 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AC130324.3-201ENST00000614165 542 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AP001486.3-201ENST00000615334 372 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AC104260.1-201ENST00000616660 539 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM55Q9BYV6 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 CBX3P1-201ENST00000325243 554 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 RNU6-552P-201ENST00000362869 119 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 Y_RNA.157-201ENST00000363638 102 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 Y_RNA.279-201ENST00000364763 95 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 RNU6-701P-201ENST00000384059 107 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 RNA5SP345-201ENST00000410646 108 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 RNU6-373P-201ENST00000411247 98 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 USP9YP7-201ENST00000436723 430 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 MTND1P18-201ENST00000448191 573 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 AL354685.2-201ENST00000448218 1447 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 NDUFS5P3-201ENST00000450668 321 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 USP9YP32-201ENST00000452432 430 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 RPS24P6-201ENST00000452670 400 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 AL162395.1-201ENST00000457882 422 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 IGLV2-34-201ENST00000490007 283 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 RPL38P4-201ENST00000502376 214 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 MLLT10P2-201ENST00000506434 249 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 OR5B10P-201ENST00000532869 642 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 AL138976.2-201ENST00000563989 694 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 AC005255.1-201ENST00000593748 216 ntBASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM55Q9BYV6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms