Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.76□□□□□ -1.49
NPAS3Q8IXF0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.76□□□□□ -1.49
NPAS3Q8IXF0 COX6B1P6-201ENST00000522347 255 ntBASIC5.76□□□□□ -1.49
NPAS3Q8IXF0 RANP3-201ENST00000530970 276 ntBASIC5.76□□□□□ -1.49
NPAS3Q8IXF0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.76□□□□□ -1.49
NPAS3Q8IXF0 MIR4679-2-201ENST00000578358 77 ntBASIC5.76□□□□□ -1.49
NPAS3Q8IXF0 AC006363.1-201ENST00000603806 463 ntBASIC5.76□□□□□ -1.49
NPAS3Q8IXF0 AC098826.3-201ENST00000603823 466 ntBASIC5.76□□□□□ -1.49
NPAS3Q8IXF0 AL352984.2-202ENST00000613699 155 ntBASIC5.76□□□□□ -1.49
NPAS3Q8IXF0 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
NPAS3Q8IXF0 AC008568.2-201ENST00000623862 2313 ntBASIC5.76□□□□□ -1.49
NPAS3Q8IXF0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.76□□□□□ -1.49
NPAS3Q8IXF0 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.76□□□□□ -1.49
NPAS3Q8IXF0 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NPAS3Q8IXF0 AL449283.1-201ENST00000602631 3403 ntBASIC5.76□□□□□ -1.49
NPAS3Q8IXF0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 SNORA67-201ENST00000384423 137 ntBASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 MIR320B1-201ENST00000390209 79 ntBASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 RNA5SP91-201ENST00000390902 119 ntBASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 MTCYBP2-201ENST00000407745 171 ntBASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 RNU6-174P-201ENST00000410406 106 ntBASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 COX6CP14-201ENST00000469580 174 ntBASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 BX284632.1-201ENST00000478218 541 ntBASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 CYCTP-201ENST00000504253 315 ntBASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 RNU4-57P-201ENST00000515980 135 ntBASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 RNU6-426P-201ENST00000516464 97 ntBASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 LSM6P2-201ENST00000552208 177 ntBASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 COX6CP3-201ENST00000580869 223 ntBASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 AC018809.2-201ENST00000602436 3823 ntBASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 HSPE1P14-201ENST00000605812 302 ntBASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 MIR6748-201ENST00000610433 71 ntBASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 AL161616.1-201ENST00000611867 286 ntBASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.75□□□□□ -1.49
NPAS3Q8IXF0 IRF5P1-201ENST00000504852 2164 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 Y_RNA.44-201ENST00000362676 108 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 Y_RNA.234-201ENST00000364409 97 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 Y_RNA.399-201ENST00000383955 105 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 Y_RNA.439-201ENST00000384119 94 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 SNORA16A-201ENST00000384342 137 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 AL590290.1-201ENST00000405336 380 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 RNU6-257P-201ENST00000410238 98 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 RPL23AP4-201ENST00000427757 463 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 AC073410.1-201ENST00000435125 589 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 AL389915.2-201ENST00000454576 441 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 RNU2-69P-201ENST00000516061 100 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 AC104576.1-201ENST00000524225 88 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 ELOCP5-201ENST00000604924 333 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 NANOGP3-201ENST00000605855 286 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 AL359547.2-201ENST00000615810 418 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 GABPAP-201ENST00000419271 1356 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 TCP11X1-202ENST00000622971 1372 ntBASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.74□□□□□ -1.49
NPAS3Q8IXF0 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms