Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.8□□□□□ -1.48
USPL1Q5W0Q7 AC124068.1-201ENST00000563131 678 ntBASIC5.8□□□□□ -1.48
USPL1Q5W0Q7 AC093249.1-201ENST00000567049 203 ntBASIC5.8□□□□□ -1.48
USPL1Q5W0Q7 AC006504.6-201ENST00000590142 199 ntBASIC5.8□□□□□ -1.48
USPL1Q5W0Q7 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.8□□□□□ -1.48
USPL1Q5W0Q7 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.8□□□□□ -1.48
USPL1Q5W0Q7 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
USPL1Q5W0Q7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
USPL1Q5W0Q7 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.8□□□□□ -1.48
USPL1Q5W0Q7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.8□□□□□ -1.48
USPL1Q5W0Q7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.8□□□□□ -1.48
USPL1Q5W0Q7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.8□□□□□ -1.48
USPL1Q5W0Q7 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.8□□□□□ -1.48
USPL1Q5W0Q7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
USPL1Q5W0Q7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 AC125257.1-201ENST00000560400 2930 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 PHKBP1-201ENST00000450951 1951 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 Y_RNA.22-201ENST00000362492 102 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 RNU6-278P-201ENST00000390945 109 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 RNU2-29P-201ENST00000410423 189 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 MTCO2P27-201ENST00000420740 428 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 OR2AH1P-201ENST00000425717 928 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 FTH1P1-201ENST00000437933 532 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 GTF2IP13-201ENST00000438487 386 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 RPL21P89-201ENST00000444021 467 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 PHBP16-201ENST00000446318 950 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 PPP1R2P5-201ENST00000457256 603 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 AC130509.1-201ENST00000464158 433 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 AC090686.1-201ENST00000481577 749 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 AC020593.1-201ENST00000507399 299 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 RNA5SP249-201ENST00000516127 99 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 RN7SKP219-201ENST00000516825 296 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 AP003730.1-201ENST00000524605 285 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 OR4P1P-201ENST00000530808 1136 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 AL591034.3-201ENST00000605511 685 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 AC103710.2-201ENST00000609912 942 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 MIR3653-201ENST00000625572 110 ntBASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.79□□□□□ -1.48
USPL1Q5W0Q7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 RN7SKP280-201ENST00000364196 304 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 RNA5SP366-201ENST00000365454 123 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 AL359837.1-201ENST00000381357 287 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 RNU1-13P-201ENST00000384499 162 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 RNU6-738P-201ENST00000384531 106 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 MIR548P-201ENST00000408336 84 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 RNA5SP317-201ENST00000410176 116 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 Y_RNA.615-201ENST00000410769 117 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 RN7SKP247-201ENST00000411094 308 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 RNA5SP311-201ENST00000411290 116 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 NDUFB4P5-201ENST00000415445 361 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 AC105402.2-201ENST00000438503 358 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 BRK1P2-201ENST00000442875 223 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 AC006480.1-201ENST00000449887 378 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 AC239809.1-201ENST00000450470 217 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 RPL21P99-201ENST00000480369 423 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 RN7SL809P-201ENST00000482040 297 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 AC020890.1-201ENST00000491837 504 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 RNA5SP315-201ENST00000516340 116 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 RNU7-51P-201ENST00000516560 62 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 RNA5SP312-201ENST00000517068 116 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 AP001029.3-201ENST00000588063 596 ntBASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.78□□□□□ -1.48
USPL1Q5W0Q7 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
USPL1Q5W0Q7 AC007529.1-201ENST00000418574 2178 ntBASIC5.77□□□□□ -1.49
USPL1Q5W0Q7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
USPL1Q5W0Q7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
USPL1Q5W0Q7 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
USPL1Q5W0Q7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USPL1Q5W0Q7 AL136164.3-201ENST00000624429 3978 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms